Difference between revisions of "23S-rRNA-uridine746"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATP_LPAREN_3h_RPAREN_tm ATP_LPAREN_3h_RPAREN_tm] == * direction: ** left-to-right * common-name: **...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTANAMIDE-NH3-RXN GUANIDINOBUTANAMIDE-NH3-RXN] == * direction: ** left-to-right * common-...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTANAMIDE-NH3-RXN GUANIDINOBUTANAMIDE-NH3-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** amidase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[4-GUANIDO-BUTYRAMIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-592]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ16279]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ01848]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | * Gene: [[SJ22527]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ11012]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[ARGDEG-V-PWY]], L-arginine degradation X (arginine monooxygenase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34376 34376] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03180 R03180] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=amidase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-3.5.1.4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=orthology|annotation}} |
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:24, 26 August 2019
Contents
Reaction GUANIDINOBUTANAMIDE-NH3-RXN
- direction:
- left-to-right
- common-name:
- amidase
- ec-number:
Reaction formula
- 1 4-GUANIDO-BUTYRAMIDE[c] + 1 WATER[c] => 1 AMMONIUM[c] + 1 CPD-592[c]
Gene(s) associated with this reaction
- Gene: SJ16279
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ01848
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ22527
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ11012
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- ARGDEG-V-PWY, L-arginine degradation X (arginine monooxygenase pathway): ARGDEG-V-PWY
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links