Difference between revisions of "24-26-N-linked-Glycan"

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(Created page with "Category:gene == Gene SJ21816 == * transcription-direction: ** negative * right-end-position: ** 52761 * left-end-position: ** 42991 * centisome-position: ** 23.141186...")
 
(Created page with "Category:metabolite == Metabolite 24-26-N-linked-Glycan == * common-name: ** a {β-d-glcnac-(1→2)-[β-d-glcnac-(1→4)]-α-d-man-(1→3)-[β-d-...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ21816 ==
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== Metabolite 24-26-N-linked-Glycan ==
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* transcription-direction:
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* common-name:
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** negative
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** a {β-d-glcnac-(1→2)-[β-d-glcnac-(1→4)]-α-d-man-(1→3)-[β-d-glcnac-(1→2)-[β-d-glcnac-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-β-d-glcnac}-n-asn-[protein]
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* right-end-position:
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== Reaction(s) known to consume the compound ==
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** 52761
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* [[2.4.1.201-RXN]]
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* left-end-position:
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== Reaction(s) known to produce the compound ==
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** 42991
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* [[2.4.1.155-RXN]]
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* centisome-position:
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== Reaction(s) of unknown directionality ==
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** 23.141186   
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{{#set: common-name=a {β-d-glcnac-(1→2)-[β-d-glcnac-(1→4)]-α-d-man-(1→3)-[β-d-glcnac-(1→2)-[β-d-glcnac-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-β-d-glcnac}-n-asn-[protein]}}
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== Organism(s) associated with this gene  ==
 
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* [[S.japonica_carotenoid_curated]]
 
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== Reaction(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[CDPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[DADPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[DCDPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[DGDPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[DTDPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[DUDPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[GDPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[NUCLEOSIDE-DIP-KIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-14120]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-14228]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[UDPKIN-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-7205]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7220]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7227]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7224]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7197]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-166]]
 
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** '''14''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7222]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7226]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7187]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PPGPPMET-PWY]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7221]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7176]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=52761}}
 
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{{#set: left-end-position=42991}}
 
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{{#set: centisome-position=23.141186    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=11}}
 
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{{#set: nb pathway associated=16}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite 24-26-N-linked-Glycan

  • common-name:
    • a {β-d-glcnac-(1→2)-[β-d-glcnac-(1→4)]-α-d-man-(1→3)-[β-d-glcnac-(1→2)-[β-d-glcnac-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-β-d-glcnac}-n-asn-[protein]

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Property "Common-name" (as page type) with input value "a {β-d-glcnac-(1→2)-[β-d-glcnac-(1→4)]-α-d-man-(1→3)-[β-d-glcnac-(1→2)-[β-d-glcnac-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-β-d-glcnac}-n-asn-[protein" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=24-26-N-linked-Glycan&oldid=137251"