Difference between revisions of "2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.19.1-RXN 1.14.19.1-RXN] == * direction: ** left-to-right * common-name: ** stearoyl-coa 9-desa...")
(Created page with "Category:metabolite == Metabolite UDP-D-XYLOSE == * common-name: ** udp-α-d-xylose * smiles: ** c3(oc(op(=o)([o-])op(=o)([o-])occ1(oc(c(o)c(o)1)n2(c=cc(=o)nc(=o)2)))...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.19.1-RXN 1.14.19.1-RXN] ==
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== Metabolite UDP-D-XYLOSE ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** stearoyl-coa 9-desaturase
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** udp-α-d-xylose
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/1.14.19.1 ec-1.14.19.1]
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** c3(oc(op(=o)([o-])op(=o)([o-])occ1(oc(c(o)c(o)1)n2(c=cc(=o)nc(=o)2)))c(o)c(o)c(o)3)
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== Reaction formula ==
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* inchi-key:
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* 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[STEAROYL-COA]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[OLEOYL-COA]][c] '''+''' 2 [[WATER]][c]
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** dqqdlyvhotzlor-ocimbmbzsa-l
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ04243]]
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** 534.263
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** Category: [[orthology]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[2.4.2.26-RXN]]
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* Gene: [[SJ14681]]
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* [[2.4.2.38-RXN]]
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** Category: [[annotation]]
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* [[2.7.7.11-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9104]]
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* Gene: [[SJ01253]]
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* [[UA4E]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[2.7.7.11-RXN]]
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** Category: [[orthology]]
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* [[UA4E]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
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* Gene: [[SJ09228]]
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* [[UGDC]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: common-name=udp-α-d-xylose}}
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== Pathway(s) ==
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{{#set: inchi-key=inchikey=dqqdlyvhotzlor-ocimbmbzsa-l}}
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* [[PWY-5996]], oleate biosynthesis II (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5996 PWY-5996]
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{{#set: molecular-weight=534.263}}
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19722 19722]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R02222 R02222]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=stearoyl-coa 9-desaturase}}
 
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{{#set: ec-number=ec-1.14.19.1}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Revision as of 20:38, 18 December 2020

Metabolite UDP-D-XYLOSE

  • common-name:
    • udp-α-d-xylose
  • smiles:
    • c3(oc(op(=o)([o-])op(=o)([o-])occ1(oc(c(o)c(o)1)n2(c=cc(=o)nc(=o)2)))c(o)c(o)c(o)3)
  • inchi-key:
    • dqqdlyvhotzlor-ocimbmbzsa-l
  • molecular-weight:
    • 534.263

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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