Difference between revisions of "3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN"

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(Created page with "Category:reaction == Reaction RXN-7828 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1 ec-2.4.1] == Reaction formula == * 1 CPD-12575...")
(Created page with "Category:reaction == Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate hydroxymethyltransferase * ec-nu...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7828 ==
+
== Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** 3-methyl-2-oxobutanoate hydroxymethyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1 ec-2.4.1]
+
** [http://enzyme.expasy.org/EC/2.1.2.11 ec-2.1.2.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12575]][c] '''+''' 1 [[PELARGONIDIN-3-GLUCOSIDE-CMPD]][c] '''=>''' 1 [[CPD-7137]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06217]]
+
* Gene: [[SJ10361]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10802]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5268]], salvianin biosynthesis:
+
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5139]], pelargonidin conjugates biosynthesis:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR115230
−
{{#set: ec-number=ec-2.4.1}}
+
* RHEA:
−
{{#set: nb gene associated=2}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11827 11827]
−
{{#set: nb pathway associated=2}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=orthology}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
−
{{#set: reconstruction tool=pantograph}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
 +
** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
 +
** [http://www.uniprot.org/uniprot/P31057 P31057]
 +
** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
 +
** [http://www.uniprot.org/uniprot/P38122 P38122]
 +
** [http://www.uniprot.org/uniprot/Q09672 Q09672]
 +
** [http://www.uniprot.org/uniprot/P52997 P52997]
 +
** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
 +
** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
 +
** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
 +
** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
 +
** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=3-methyl-2-oxobutanoate hydroxymethyltransferase}}
 +
{{#set: ec-number=ec-2.1.2.11}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:36, 15 March 2021

Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN

  • direction:
    • reversible
  • common-name:
    • 3-methyl-2-oxobutanoate hydroxymethyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PANTO-PWY, phosphopantothenate biosynthesis I:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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