Difference between revisions of "3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] == * direction: ** left-to-right * common-name: ** nad+ synthe...")
(Created page with "Category:reaction == Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate hydroxymethyltransferase * ec-nu...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] ==
+
== Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** nad+ synthetase, glutamine dependent
+
** 3-methyl-2-oxobutanoate hydroxymethyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]
+
** [http://enzyme.expasy.org/EC/2.1.2.11 ec-2.1.2.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20196]]
+
* Gene: [[SJ10361]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
+
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
 
−
** '''6''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115230
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11827 11827]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
+
** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
−
** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
+
** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
−
** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
+
** [http://www.uniprot.org/uniprot/P31057 P31057]
−
** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
+
** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P38122 P38122]
−
{{#set: common-name=nad+ synthetase, glutamine dependent}}
+
** [http://www.uniprot.org/uniprot/Q09672 Q09672]
−
{{#set: ec-number=ec-6.3.5.1}}
+
** [http://www.uniprot.org/uniprot/P52997 P52997]
 +
** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
 +
** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
 +
** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
 +
** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
 +
** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=3-methyl-2-oxobutanoate hydroxymethyltransferase}}
 +
{{#set: ec-number=ec-2.1.2.11}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN

  • direction:
    • reversible
  • common-name:
    • 3-methyl-2-oxobutanoate hydroxymethyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PANTO-PWY, phosphopantothenate biosynthesis I:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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