Difference between revisions of "3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7598 PWY-7598] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-11...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] == * direction: ** left-to-right * common-name: ** nad+ synthe...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7598 PWY-7598] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-1117]
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** left-to-right
 
* common-name:
 
* common-name:
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** α-linolenate biosynthesis ii (cyanobacteria)
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** nad+ synthetase, glutamine dependent
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-16071]]
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** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]
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== Reaction(s) not found ==
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== Reaction formula ==
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All reactions of this pathways are in present
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* 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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{{#set: taxonomic-range=tax-1117}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=α-linolenate biosynthesis ii (cyanobacteria)}}
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* Gene: [[SJ20196]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=1.0}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=1}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
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** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
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** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
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** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
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{{#set: direction=left-to-right}}
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{{#set: common-name=nad+ synthetase, glutamine dependent}}
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{{#set: ec-number=ec-6.3.5.1}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=5}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 14:29, 26 August 2019

Reaction NAD-SYNTH-GLN-RXN

  • direction:
    • left-to-right
  • common-name:
    • nad+ synthetase, glutamine dependent
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7761, NAD salvage pathway II (PNC IV cycle): PWY-7761
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: PWY-5653
    • 3 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSAL-PWY, NAD salvage pathway I (PNC VI cycle): PYRIDNUCSAL-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD de novo biosynthesis I (from aspartate): PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5381, pyridine nucleotide cycling (plants): PWY-5381
    • 6 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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