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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** left-to-right | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33154 tax-33154] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1239 tax-1239] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-201174 tax-201174] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-976 tax-976] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-1224] |
| | * common-name: | | * common-name: |
| − | ** nad+ synthetase, glutamine dependent | + | ** chitin degradation ii (vibrio) |
| − | * ec-number:
| + | == Reaction(s) found == |
| − | ** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]
| + | * [[3.2.1.14-RXN]] |
| − | == Reaction formula == | + | * [[RXN-12623]] |
| − | * 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
| + | * [[RXN-12625]] |
| − | == Gene(s) associated with this reaction ==
| + | == Reaction(s) not found == |
| − | * Gene: [[SJ20196]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-323 TRANS-RXN-323] |
| − | ** Category: [[annotation]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-12626 RXN-12626] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | + | {{#set: taxonomic-range=tax-1239|tax-33090|tax-201174|tax-976|tax-33154|tax-1224}} |
| − | ** Category: [[orthology]]
| + | {{#set: common-name=chitin degradation ii (vibrio)}} |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: nb reaction found=3}} |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: completion rate=0.6}} |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: nb total reaction=5}} |
| − | == Pathway(s) == | |
| − | * [[PWY-7761]], NAD salvage pathway II (PNC IV cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761] | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
| |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway | |
| − | * [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
| |
| − | ** '''4''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
| |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
| |
| − | ** '''6''' reactions found over '''11''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
| |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=nad+ synthetase, glutamine dependent}} | |
| − | {{#set: ec-number=ec-6.3.5.1}} | |
| − | {{#set: nb gene associated=1}} | |
| − | {{#set: nb pathway associated=5}} | |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
| |
