Difference between revisions of "3-DEHYDROSPHINGANINE-REDUCTASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16889 RXN-16889] == * direction: ** left-to-right * common-name: ** [protein]-l-arginine &omega...")
 
(Created page with "Category:reaction == Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN == * direction: ** left-to-right * common-name: ** 3-ketodihydrosphingosine reductase * ec-number: ** [htt...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16889 RXN-16889] ==
+
== Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** [protein]-l-arginine ω-n-methyltransferase
+
** 3-ketodihydrosphingosine reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.321 ec-2.1.1.321]
+
** [http://enzyme.expasy.org/EC/1.1.1.102 ec-1.1.1.102]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-L-Arginines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-N-omega-methyl-arginine]][c]
+
* 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13612]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ12778]]
−
* Gene: [[SJ14634]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16975]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02158]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04694]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16649]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16170]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17520]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16169]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15815]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15614]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18917]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast):
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5129]], sphingolipid biosynthesis (plants):
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY3DJ-12]], ceramide de novo biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR94866
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48101 48101]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22642 22642]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=[protein]-l-arginine &omega;-n-methyltransferase}}
+
{{#set: common-name=3-ketodihydrosphingosine reductase}}
−
{{#set: ec-number=ec-2.1.1.321}}
+
{{#set: ec-number=ec-1.1.1.102}}
−
{{#set: nb gene associated=11}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 3-ketodihydrosphingosine reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SPHINGOLIPID-SYN-PWY, sphingolipid biosynthesis (yeast):
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5129, sphingolipid biosynthesis (plants):
    • 4 reactions found over 13 reactions in the full pathway
  • PWY3DJ-12, ceramide de novo biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR94866
  • RHEA:
  • LIGAND-RXN:





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