Difference between revisions of "3-OXOPIMELOYL-COA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.93-RXN 4.2.1.93-RXN] == * direction: ** left-to-right * common-name: ** atp-dependent nadh-hy...")
(Created page with "Category:gene == Gene SJ17442 == * transcription-direction: ** positive * right-end-position: ** 319389 * left-end-position: ** 304921 * centisome-position: ** 45.085915...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.93-RXN 4.2.1.93-RXN] ==
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== Gene SJ17442 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** atp-dependent nadh-hydrate dehydratase
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** 319389
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/4.2.1.93 ec-4.2.1.93]
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** 304921
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== Reaction formula ==
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* centisome-position:
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* 1 [[ATP]][c] '''+''' 1 [[CPD-653]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** 45.085915   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[SJ04267]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[3.1.26.5-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXN0-6480]]
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* [[PWY-6938]], NADH repair: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6938 PWY-6938]
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** Category: [[annotation]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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== Pathway(s) associated ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY0-1479]]
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== External links  ==
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** '''4''' reactions found over '''10''' reactions in the full pathway
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* RHEA:
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{{#set: transcription-direction=positive}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19018 19018]
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{{#set: right-end-position=319389}}
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* LIGAND-RXN:
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{{#set: left-end-position=304921}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00129 R00129]
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{{#set: centisome-position=45.085915    }}
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{{#set: direction=left-to-right}}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: common-name=atp-dependent nadh-hydrate dehydratase}}
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{{#set: nb reaction associated=2}}
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{{#set: ec-number=ec-4.2.1.93}}
 
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{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 09:28, 27 August 2019

Gene SJ17442

  • transcription-direction:
    • positive
  • right-end-position:
    • 319389
  • left-end-position:
    • 304921
  • centisome-position:
    • 45.085915

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway




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