Difference between revisions of "3-Prime-Phosphate-Terminated-RNAs"

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(Created page with "Category:gene == Gene SJ14913 == * transcription-direction: ** negative * right-end-position: ** 184552 * left-end-position: ** 183758 * centisome-position: ** 60.31121...")
(Created page with "Category:metabolite == Metabolite CPD-11525 == * common-name: ** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-coa * smiles: ** ccc=ccc1(c(ccc(=o)1)cccc(=o)sccnc(=o)cc...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ14913 ==
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== Metabolite CPD-11525 ==
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* transcription-direction:
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* common-name:
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** negative
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** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-coa
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* right-end-position:
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* smiles:
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** 184552
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** ccc=ccc1(c(ccc(=o)1)cccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])
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* left-end-position:
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* inchi-key:
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** 183758
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** yyuzysvpfvoylb-rguwmiccsa-j
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* centisome-position:
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* molecular-weight:
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** 60.31121   
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** 983.813
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-10707]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[2.7.12.1-RXN]]
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* [[RXN-10700]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-coa}}
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* [[PROTEIN-KINASE-RXN]]
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{{#set: inchi-key=inchikey=yyuzysvpfvoylb-rguwmiccsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=983.813}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-14906]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=184552}}
 
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{{#set: left-end-position=183758}}
 
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{{#set: centisome-position=60.31121    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 

Revision as of 20:33, 18 December 2020

Metabolite CPD-11525

  • common-name:
    • 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-coa
  • smiles:
    • ccc=ccc1(c(ccc(=o)1)cccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])
  • inchi-key:
    • yyuzysvpfvoylb-rguwmiccsa-j
  • molecular-weight:
    • 983.813

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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