3-hydroxy-L-asparagine-HIF-Alpha

Reaction RXN0-2161

• direction:
  • left-to-right
• common-name:
  • l-serine:trnasec ligase (amp-forming)
• ec-number:
  • ec-6.1.1.11

Reaction formula

• 1 ATP[c] + 1 SER[c] + 1 tRNA-Sec[c] => 1 AMP[c] + 1 L-seryl-SEC-tRNAs[c] + 1 PPI[c]

Gene(s) associated with this reaction

• Gene: SJ07311
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: SJ14143
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a

Pathway(s)

• PWY0-901, L-selenocysteine biosynthesis I (bacteria): PWY0-901
  • 2 reactions found over 3 reactions in the full pathway
• PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
  • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

• category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
• category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a

External links

• RHEA:
  • 42581
• LIGAND-RXN:
  • R08218