Difference between revisions of "3-oxo-cis-D9-hexadecenoyl-ACPs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] == * direction: ** left-to-right * common-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** nitrate reductase
 
−
** nitrate reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.1.3 ec-1.7.1.3]
+
** [http://enzyme.expasy.org/EC/4.1.2.55 ec-4.1.2.55]
 +
** [http://enzyme.expasy.org/EC/4.1.2.14 ec-4.1.2.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[2-KETO-3-DEOXY-6-P-GLUCONATE]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00644]]
+
* Gene: [[SJ03464]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ15446]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
+
* [[PWY-7310]], D-glucosaminate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7310 PWY-7310]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[ENTNER-DOUDOROFF-PWY]], Entner-Doudoroff shunt: [http://metacyc.org/META/NEW-IMAGE?object=ENTNER-DOUDOROFF-PWY ENTNER-DOUDOROFF-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7562]], 3,6-anhydro-α-L-galactopyranose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7562 PWY-7562]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6507]], 4-deoxy-L-threo-hex-4-enopyranuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19063 19063]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17090 17090]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00796 R00796]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05605 R05605]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q12561 Q12561]
+
** [http://www.uniprot.org/uniprot/P44480 P44480]
−
** [http://www.uniprot.org/uniprot/P22945 P22945]
+
** [http://www.uniprot.org/uniprot/P0A955 P0A955]
−
** [http://www.uniprot.org/uniprot/P39863 P39863]
+
** [http://www.uniprot.org/uniprot/P00885 P00885]
−
** [http://www.uniprot.org/uniprot/Q05531 Q05531]
+
** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
−
** [http://www.uniprot.org/uniprot/P36858 P36858]
+
** [http://www.uniprot.org/uniprot/O25729 O25729]
−
** [http://www.uniprot.org/uniprot/P36842 P36842]
+
** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
−
** [http://www.uniprot.org/uniprot/P39864 P39864]
+
** [http://www.uniprot.org/uniprot/O83578 O83578]
−
** [http://www.uniprot.org/uniprot/Q01696 Q01696]
+
** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
−
** [http://www.uniprot.org/uniprot/Q00284 Q00284]
+
** [http://www.uniprot.org/uniprot/P50846 P50846]
 +
** [http://www.uniprot.org/uniprot/P38448 P38448]
 +
** [http://www.uniprot.org/uniprot/Q55872 Q55872]
 +
** [http://www.uniprot.org/uniprot/P94802 P94802]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrate reductase|nitrate reductase (nadph)}}
+
{{#set: ec-number=ec-4.1.2.14|ec-4.1.2.55}}
−
{{#set: ec-number=ec-1.7.1.3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=7}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 09:29, 27 August 2019

Reaction KDPGALDOL-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7310, D-glucosaminate degradation: PWY-7310
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative): PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • ENTNER-DOUDOROFF-PWY, Entner-Doudoroff shunt: ENTNER-DOUDOROFF-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7562, 3,6-anhydro-α-L-galactopyranose degradation: PWY-7562
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7242, D-fructuronate degradation: PWY-7242
    • 1 reactions found over 4 reactions in the full pathway
  • GALACTUROCAT-PWY, D-galacturonate degradation I: GALACTUROCAT-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6507, 4-deoxy-L-threo-hex-4-enopyranuronate degradation: PWY-6507
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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