Difference between revisions of "3.1.1.47-RXN"

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(Created page with "Category:reaction == Reaction D-OCTOPINE-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** d-octopine dehydrogenase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN3DJ-11417 == * direction: ** left-to-right * common-name: ** sphingosine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.91 ec-2...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction D-OCTOPINE-DEHYDROGENASE-RXN ==
+
== Reaction RXN3DJ-11417 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** d-octopine dehydrogenase
+
** sphingosine kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5 ec-1.5]
+
** [http://enzyme.expasy.org/EC/2.7.1.91 ec-2.7.1.91]
−
* synonymous:
 
−
** d-octopine synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Acceptor]][c] '''+''' 1 [[CPD-309]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ARG]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[SPHINGOSINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD3DJ-11366]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15888]]
+
* Gene: [[SJ16261]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[OCTOPINEDEG-PWY]], octopine degradation:
+
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P0A395 P0A395]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=35848 35848]
−
** [http://www.uniprot.org/uniprot/P0A394 P0A394]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/Q44297 Q44297]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01926 R01926]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=d-octopine dehydrogenase}}
+
{{#set: common-name=sphingosine kinase}}
−
{{#set: ec-number=ec-1.5}}
+
{{#set: ec-number=ec-2.7.1.91}}
−
{{#set: synonymous=d-octopine synthase}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:02, 5 January 2021

Reaction RXN3DJ-11417

  • direction:
    • left-to-right
  • common-name:
    • sphingosine kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3DJ-11470, sphingosine and sphingosine-1-phosphate metabolism:
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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