Difference between revisions of "3.1.11.2-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12177 RXN-12177] == * direction: ** left-to-right * common-name: ** unsaturated chondroitin 6-s...")
(Created page with "Category:reaction == Reaction 3.1.11.2-RXN == * direction: ** left-to-right * common-name: ** exodeoxyribonuclease iii * ec-number: ** [http://enzyme.expasy.org/EC/3.1.11....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12177 RXN-12177] ==
+
== Reaction 3.1.11.2-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** unsaturated chondroitin 6-sulfate disaccharide hydrolase
+
** exodeoxyribonuclease iii
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.180 ec-3.2.1.180]
+
** [http://enzyme.expasy.org/EC/3.1.11.2 ec-3.1.11.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[4-DEOXY-BETA-D-GLUC-4-ENURONOSYL-6S]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12565]][c] '''+''' 1 [[CPD-13122]][c]
+
* 1 [[DNA-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-N]][c] '''+''' 1 [[Deoxy-Ribonucleoside-Monophosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13212]]
+
* Gene: [[SJ17332]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ15657]]
+
* Gene: [[SJ04992]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12684]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6572]], chondroitin sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6572 PWY-6572]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10867 R10867]
+
** [http://www.uniprot.org/uniprot/Q9PIP0 Q9PIP0]
−
* RHEA:
+
** [http://www.uniprot.org/uniprot/Q9JSY0 Q9JSY0]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31650 31650]
+
** [http://www.uniprot.org/uniprot/P44318 P44318]
 +
** [http://www.uniprot.org/uniprot/P09030 P09030]
 +
** [http://www.uniprot.org/uniprot/O66261 O66261]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=unsaturated chondroitin 6-sulfate disaccharide hydrolase}}
+
{{#set: common-name=exodeoxyribonuclease iii}}
−
{{#set: ec-number=ec-3.2.1.180}}
+
{{#set: ec-number=ec-3.1.11.2}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction 3.1.11.2-RXN

  • direction:
    • left-to-right
  • common-name:
    • exodeoxyribonuclease iii
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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