Difference between revisions of "3.1.13.4-RXN"

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(Created page with "Category:reaction == Reaction SQUALENE-MONOOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing) * ec-num...")
(Created page with "Category:reaction == Reaction RXN66-305 == * direction: ** left-to-right * common-name: ** 14-oxolanosterol deformylase ** 4,4-dimethyl-14α-formyl-5α-cholesta-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SQUALENE-MONOOXYGENASE-RXN ==
+
== Reaction RXN66-305 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)
+
** 14-oxolanosterol deformylase
−
* ec-number:
+
** 4,4-dimethyl-14α-formyl-5α-cholesta-8,24-dien-3β-ol,nadph:oxygen oxidoreductase (14-methyl cleaving)
−
** [http://enzyme.expasy.org/EC/1.14.14.17 ec-1.14.14.17]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[SQUALENE]][c] '''=>''' 1 [[EPOXYSQUALENE]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-4573]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[44-DIMETHYL-CHOLESTA-814-24-TRIENOL]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00579]]
+
* Gene: [[SJ05072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6098]], diploterol biosynthesis:
+
* [[PWY66-341]], cholesterol biosynthesis I:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''14''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-5670]], epoxysqualene biosynthesis:
+
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''14''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21941 21941]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02874 R02874]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P52020 P52020]
 
−
** [http://www.uniprot.org/uniprot/P32476 P32476]
 
−
** [http://www.uniprot.org/uniprot/Q9T064 Q9T064]
 
−
** [http://www.uniprot.org/uniprot/O65829 O65829]
 
−
** [http://www.uniprot.org/uniprot/O65726 O65726]
 
−
** [http://www.uniprot.org/uniprot/O65727 O65727]
 
−
** [http://www.uniprot.org/uniprot/O65402 O65402]
 
−
** [http://www.uniprot.org/uniprot/O65403 O65403]
 
−
** [http://www.uniprot.org/uniprot/O65404 O65404]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)}}
+
{{#set: common-name=14-oxolanosterol deformylase|4,4-dimethyl-14α-formyl-5α-cholesta-8,24-dien-3β-ol,nadph:oxygen oxidoreductase (14-methyl cleaving)}}
−
{{#set: ec-number=ec-1.14.14.17}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}

Revision as of 19:05, 14 January 2021

Reaction RXN66-305

  • direction:
    • left-to-right
  • common-name:
    • 14-oxolanosterol deformylase
    • 4,4-dimethyl-14α-formyl-5α-cholesta-8,24-dien-3β-ol,nadph:oxygen oxidoreductase (14-methyl cleaving)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-341, cholesterol biosynthesis I:
    • 14 reactions found over 18 reactions in the full pathway
  • PWY66-4, cholesterol biosynthesis III (via desmosterol):
    • 14 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3.1.13.4-RXN&oldid=103353"