Difference between revisions of "3.1.26.3-RXN"

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(Created page with "Category:reaction == Reaction BIOTINLIG-RXN == * direction: ** left-to-right * common-name: ** biotin-[acetyl-coa-carboxylase] ligase * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction TRANSENOYLCOARED-RXN-HEXANOYL-COA/NADP//CPD0-2121/NADPH/PROTON.42. == * direction: ** left-to-right == Reaction formula == * 1.0 [[CPD0-2121]...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BIOTINLIG-RXN ==
+
== Reaction TRANSENOYLCOARED-RXN-HEXANOYL-COA/NADP//CPD0-2121/NADPH/PROTON.42. ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** biotin-[acetyl-coa-carboxylase] ligase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/6.3.4.15 ec-6.3.4.15]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[BCCP-L-lysine]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[BCCP-biotin-L-lysine]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[CPD0-2121]][c] '''+''' 1.0 [[NADPH]][c] '''+''' 1.0 [[PROTON]][c] '''=>''' 1.0 [[HEXANOYL-COA]][c] '''+''' 1.0 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10816]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06657]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19949]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07132]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06709 P06709]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ27 Q9PJ27]
 
−
** [http://www.uniprot.org/uniprot/Q9CEQ6 Q9CEQ6]
 
−
** [http://www.uniprot.org/uniprot/Q9CED9 Q9CED9]
 
−
** [http://www.uniprot.org/uniprot/Q9JWI7 Q9JWI7]
 
−
** [http://www.uniprot.org/uniprot/P48445 P48445]
 
−
** [http://www.uniprot.org/uniprot/P72816 P72816]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=biotin-[acetyl-coa-carboxylase] ligase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-6.3.4.15}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=4}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 11:26, 15 January 2021

Reaction TRANSENOYLCOARED-RXN-HEXANOYL-COA/NADP//CPD0-2121/NADPH/PROTON.42.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3.1.26.3-RXN&oldid=116417"