Difference between revisions of "3.1.26.3-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5499 PWY-5499] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-12...")
 
(Created page with "Category:reaction == Reaction 3.1.26.3-RXN == * direction: ** left-to-right * common-name: ** ribonuclease iii ** ribonuclease * ec-number: ** [http://enzyme.expasy.org/EC...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5499 PWY-5499] ==
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== Reaction 3.1.26.3-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-1224]
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** left-to-right
 
* common-name:
 
* common-name:
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** vitamin b6 degradation
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** ribonuclease iii
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== Reaction(s) found ==
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** ribonuclease
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* [[PYRIDOXINE-4-OXIDASE-RXN]]
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* ec-number:
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/3.1.26.3 ec-3.1.26.3]
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* [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.29-RXN 3.5.1.29-RXN]
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.51-RXN 4.1.1.51-RXN]
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* 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c] '''+''' 2 [[mRNA-Fragments]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8757 RXN-8757]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8756 RXN-8756]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.30-RXN 2.6.1.30-RXN]
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* Gene: [[SJ17141]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXAL-4-DEHYDROGENASE-RXN PYRIDOXAL-4-DEHYDROGENASE-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4-PYRIDOXOLACTONASE-RXN 4-PYRIDOXOLACTONASE-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.12.4-RXN 1.14.12.4-RXN]
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* Gene: [[SJ01852]]
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{{#set: taxonomic-range=tax-1224}}
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** Category: [[annotation]]
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{{#set: common-name=vitamin b6 degradation}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=1}}
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** Category: [[orthology]]
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{{#set: completion rate=0.11}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=9}}
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* Gene: [[SJ15619]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ08973]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ17143]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ08968]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s)  ==
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR115277
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
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** [http://www.uniprot.org/uniprot/P51833 P51833]
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** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
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** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
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** [http://www.uniprot.org/uniprot/P44441 P44441]
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** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
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** [http://www.uniprot.org/uniprot/P09155 P09155]
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** [http://www.uniprot.org/uniprot/Q52698 Q52698]
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** [http://www.uniprot.org/uniprot/Q49034 Q49034]
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** [http://www.uniprot.org/uniprot/O69469 O69469]
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{{#set: direction=left-to-right}}
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{{#set: common-name=ribonuclease|ribonuclease iii}}
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{{#set: ec-number=ec-3.1.26.3}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction 3.1.26.3-RXN

  • direction:
    • left-to-right
  • common-name:
    • ribonuclease iii
    • ribonuclease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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