Difference between revisions of "3.1.27.1-RXN"

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(Created page with "Category:reaction == Reaction GLYCINE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** glycine transaminase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction 3.4.11.2-RXN == * direction: ** left-to-right * common-name: ** alanyl aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.14...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYCINE-AMINOTRANSFERASE-RXN ==
+
== Reaction 3.4.11.2-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glycine transaminase
+
** alanyl aminopeptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.4 ec-2.6.1.4]
+
** [http://enzyme.expasy.org/EC/3.4.11.14 ec-3.4.11.14]
 +
** [http://enzyme.expasy.org/EC/3.4.11.2 ec-3.4.11.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLY]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[GLYOX]][c]
+
* 1 [[Peptide-with-N-terminal-Alanine]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19809]]
+
* Gene: [[SJ10244]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-181]], photorespiration:
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14092 14092]
+
** [http://www.uniprot.org/uniprot/P15144 P15144]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P15684 P15684]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00372 R00372]
+
** [http://www.uniprot.org/uniprot/P15145 P15145]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P04825 P04825]
−
{{#set: common-name=glycine transaminase}}
+
** [http://www.uniprot.org/uniprot/P45274 P45274]
−
{{#set: ec-number=ec-2.6.1.4}}
+
** [http://www.uniprot.org/uniprot/Q9JTU7 Q9JTU7]
 +
** [http://www.uniprot.org/uniprot/Q10730 Q10730]
 +
** [http://www.uniprot.org/uniprot/P15541 P15541]
 +
** [http://www.uniprot.org/uniprot/P37897 P37897]
 +
** [http://www.uniprot.org/uniprot/P37896 P37896]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=alanyl aminopeptidase}}
 +
{{#set: ec-number=ec-3.4.11.2|ec-3.4.11.14}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:27, 15 January 2021

Reaction 3.4.11.2-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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