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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-477 RXN66-477] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7161 PWY-7161] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** left-to-right | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-91827 tax-91827] |
| | * common-name: | | * common-name: |
| − | ** straight chain fatty acyl-coa ligase | + | ** polymethylated quercetin biosynthesis |
| − | ** long-chain fatty acid-coa ligase
| + | == Reaction(s) found == |
| − | * ec-number:
| + | * [[QUERCETIN-3-O-METHYLTRANSFERASE-RXN]] |
| − | ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
| + | == Reaction(s) not found == |
| − | == Reaction formula == | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-13933 RXN-13933] |
| − | * 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[Odd-Straight-Chain-234-Sat-FA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Odd-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] | + | * [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.82-RXN 2.1.1.82-RXN] |
| − | == Gene(s) associated with this reaction == | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-13929 RXN-13929] |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-13906 RXN-13906] |
| − | * Gene: [[SJ08692]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-13934 RXN-13934] |
| − | ** Category: [[annotation]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8262 RXN-8262] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-13930 RXN-13930] |
| − | * Gene: [[SJ03650]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-13932 RXN-13932] |
| − | ** Category: [[annotation]]
| + | {{#set: taxonomic-range=tax-91827}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: common-name=polymethylated quercetin biosynthesis}} |
| − | ** Category: [[orthology]]
| + | {{#set: nb reaction found=1}} |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: completion rate=0.11}} |
| − | * Gene: [[SJ05591]]
| + | {{#set: nb total reaction=9}} |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ08690]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ13972]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
| − | * Gene: [[SJ08691]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
| − | </div>
| |
| − | == Pathway(s) ==
| |
| − | * [[PWY66-388]], fatty acid α-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388] | |
| − | ** '''2''' reactions found over '''7''' reactions in the full pathway | |
| − | == Reconstruction information ==
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links == | |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=straight chain fatty acyl-coa ligase|long-chain fatty acid-coa ligase}} | |
| − | {{#set: ec-number=ec-6.2.1.3}} | |
| − | {{#set: nb gene associated=6}}
| |
| − | {{#set: nb pathway associated=1}} | |
| − | {{#set: reconstruction category=orthology|annotation}} | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | |
