Difference between revisions of "3.2.1.14-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction URACIL-PRIBOSYLTRANS-RXN == * direction: ** left-to-right * common-name: ** uracil phosphoribosyltransferase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction RXN-12521 == * direction: ** left-to-right * common-name: ** 2,4-dienoyl-coa reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.34...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction URACIL-PRIBOSYLTRANS-RXN ==
+
== Reaction RXN-12521 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** uracil phosphoribosyltransferase
+
** 2,4-dienoyl-coa reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.9 ec-2.4.2.9]
+
** [http://enzyme.expasy.org/EC/1.3.1.34 ec-1.3.1.34]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PRPP]][c] '''+''' 1 [[URACIL]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[TETRADEHYDROACYL-COA]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Trans-3-enoyl-CoAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16689]]
+
* Gene: [[SJ18892]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18806]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11023]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ02034]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7183]], pyrimidine nucleobases salvage I:
+
* [[PWY-6837]], fatty acid β-oxidation V (unsaturated, odd number, di-isomerase-dependent):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13017 13017]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00966 R00966]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A8F0 P0A8F0]
 
−
** [http://www.uniprot.org/uniprot/P39765 P39765]
 
−
** [http://www.uniprot.org/uniprot/Q9CEC9 Q9CEC9]
 
−
** [http://www.uniprot.org/uniprot/P47276 P47276]
 
−
** [http://www.uniprot.org/uniprot/O27186 O27186]
 
−
** [http://www.uniprot.org/uniprot/P43857 P43857]
 
−
** [http://www.uniprot.org/uniprot/O67914 O67914]
 
−
** [http://www.uniprot.org/uniprot/P44722 P44722]
 
−
** [http://www.uniprot.org/uniprot/Q9PN13 Q9PN13]
 
−
** [http://www.uniprot.org/uniprot/P65941 P65941]
 
−
** [http://www.uniprot.org/uniprot/P39149 P39149]
 
−
** [http://www.uniprot.org/uniprot/P18562 P18562]
 
−
** [http://www.uniprot.org/uniprot/P41007 P41007]
 
−
** [http://www.uniprot.org/uniprot/P72753 P72753]
 
−
** [http://www.uniprot.org/uniprot/Q55758 Q55758]
 
−
** [http://www.uniprot.org/uniprot/P93394 P93394]
 
−
** [http://www.uniprot.org/uniprot/O65583 O65583]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=uracil phosphoribosyltransferase}}
+
{{#set: common-name=2,4-dienoyl-coa reductase}}
−
{{#set: ec-number=ec-2.4.2.9}}
+
{{#set: ec-number=ec-1.3.1.34}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:27, 15 January 2021

Reaction RXN-12521

  • direction:
    • left-to-right
  • common-name:
    • 2,4-dienoyl-coa reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6837, fatty acid β-oxidation V (unsaturated, odd number, di-isomerase-dependent):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3.2.1.14-RXN&oldid=116789"