Difference between revisions of "3.2.1.14-RXN"

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(Created page with "Category:reaction == Reaction THYMIDYLATESYN-RXN == * direction: ** left-to-right * common-name: ** thymidylate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1...")
(Created page with "Category:reaction == Reaction 3.2.1.14-RXN == * direction: ** left-to-right * common-name: ** chitinase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.14 ec-3.2.1.14]...")
 
(6 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction THYMIDYLATESYN-RXN ==
+
== Reaction 3.2.1.14-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** thymidylate synthase
+
** chitinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.45 ec-2.1.1.45]
+
** [http://enzyme.expasy.org/EC/3.2.1.14 ec-3.2.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DUMP]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''=>''' 1 [[DIHYDROFOLATE-GLU-N]][c] '''+''' 1 [[TMP]][c]
+
* 1 [[CHITIN]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Chitodextrins]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19601]]
+
* Gene: [[SJ19451]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
+
* [[PWY-7822]], chitin degradation III (Serratia):
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7199]], pyrimidine deoxyribonucleosides salvage:
+
* [[PWY-6902]], chitin degradation II (Vibrio):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
+
* [[PWY-6855]], chitin degradation I (archaea):
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
* [[1CMET2-PWY]], folate transformations III (E. coli):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3841]], folate transformations II (plants):
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
 
−
** '''14''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
+
* METANETX-RXN : MNXR115338
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12105 12105]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02101 R02101]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P19368 P19368]
+
** [http://www.uniprot.org/uniprot/P07254 P07254]
−
** [http://www.uniprot.org/uniprot/Q07422 Q07422]
+
** [http://www.uniprot.org/uniprot/P23951 P23951]
−
** [http://www.uniprot.org/uniprot/P47469 P47469]
+
** [http://www.uniprot.org/uniprot/P17541 P17541]
−
** [http://www.uniprot.org/uniprot/Q9JT57 Q9JT57]
+
** [http://www.uniprot.org/uniprot/P29030 P29030]
−
** [http://www.uniprot.org/uniprot/P42326 P42326]
+
** [http://www.uniprot.org/uniprot/P20533 P20533]
−
** [http://www.uniprot.org/uniprot/O02604 O02604]
+
** [http://www.uniprot.org/uniprot/P29029 P29029]
−
** [http://www.uniprot.org/uniprot/P07382 P07382]
+
** [http://www.uniprot.org/uniprot/P27050 P27050]
−
** [http://www.uniprot.org/uniprot/P16126 P16126]
+
** [http://www.uniprot.org/uniprot/P11218 P11218]
−
** [http://www.uniprot.org/uniprot/P13922 P13922]
+
** [http://www.uniprot.org/uniprot/P29115 P29115]
−
** [http://www.uniprot.org/uniprot/P20712 P20712]
+
** [http://www.uniprot.org/uniprot/Q54501 Q54501]
−
** [http://www.uniprot.org/uniprot/P11044 P11044]
+
** [http://www.uniprot.org/uniprot/P19172 P19172]
−
** [http://www.uniprot.org/uniprot/P45350 P45350]
+
** [http://www.uniprot.org/uniprot/P29026 P29026]
−
** [http://www.uniprot.org/uniprot/P45352 P45352]
+
** [http://www.uniprot.org/uniprot/Q23737 Q23737]
−
** [http://www.uniprot.org/uniprot/P51820 P51820]
+
** [http://www.uniprot.org/uniprot/P36362 P36362]
−
** [http://www.uniprot.org/uniprot/P0C0M4 P0C0M4]
+
** [http://www.uniprot.org/uniprot/P19171 P19171]
−
** [http://www.uniprot.org/uniprot/Q27828 Q27828]
+
** [http://www.uniprot.org/uniprot/P29027 P29027]
−
** [http://www.uniprot.org/uniprot/P09249 P09249]
+
** [http://www.uniprot.org/uniprot/P29116 P29116]
−
** [http://www.uniprot.org/uniprot/P12462 P12462]
+
** [http://www.uniprot.org/uniprot/Q9R5K8 Q9R5K8]
−
** [http://www.uniprot.org/uniprot/P07606 P07606]
+
** [http://www.uniprot.org/uniprot/Q7M233 Q7M233]
−
** [http://www.uniprot.org/uniprot/P00471 P00471]
+
** [http://www.uniprot.org/uniprot/Q9R5K7 Q9R5K7]
−
** [http://www.uniprot.org/uniprot/P0A884 P0A884]
+
** [http://www.uniprot.org/uniprot/Q9CE95 Q9CE95]
−
** [http://www.uniprot.org/uniprot/P00469 P00469]
+
** [http://www.uniprot.org/uniprot/Q59145 Q59145]
−
** [http://www.uniprot.org/uniprot/O81395 O81395]
+
** [http://www.uniprot.org/uniprot/Q9FRV1 Q9FRV1]
−
** [http://www.uniprot.org/uniprot/Q05763 Q05763]
+
** [http://www.uniprot.org/uniprot/Q56077 Q56077]
−
** [http://www.uniprot.org/uniprot/Q39687 Q39687]
+
** [http://www.uniprot.org/uniprot/Q40667 Q40667]
−
** [http://www.uniprot.org/uniprot/Q9YTJ6 Q9YTJ6]
+
** [http://www.uniprot.org/uniprot/Q40668 Q40668]
−
** [http://www.uniprot.org/uniprot/P06785 P06785]
+
** [http://www.uniprot.org/uniprot/Q9S9F7 Q9S9F7]
−
** [http://www.uniprot.org/uniprot/P04818 P04818]
+
** [http://www.uniprot.org/uniprot/P54196 P54196]
−
** [http://www.uniprot.org/uniprot/P07607 P07607]
+
** [http://www.uniprot.org/uniprot/O49824 O49824]
−
** [http://www.uniprot.org/uniprot/P13100 P13100]
+
** [http://www.uniprot.org/uniprot/O49825 O49825]
 +
** [http://www.uniprot.org/uniprot/O49826 O49826]
 +
** [http://www.uniprot.org/uniprot/O49827 O49827]
 +
** [http://www.uniprot.org/uniprot/Q7GCM7 Q7GCM7]
 +
** [http://www.uniprot.org/uniprot/O22080 O22080]
 +
** [http://www.uniprot.org/uniprot/O49830 O49830]
 +
** [http://www.uniprot.org/uniprot/Q9SXY2 Q9SXY2]
 +
** [http://www.uniprot.org/uniprot/O60994 O60994]
 +
** [http://www.uniprot.org/uniprot/Q9RHU3 Q9RHU3]
 +
** [http://www.uniprot.org/uniprot/Q9SLP4 Q9SLP4]
 +
** [http://www.uniprot.org/uniprot/Q9RHU5 Q9RHU5]
 +
** [http://www.uniprot.org/uniprot/Q9RHU4 Q9RHU4]
 +
** [http://www.uniprot.org/uniprot/Q7M1Q9 Q7M1Q9]
 +
** [http://www.uniprot.org/uniprot/Q7M443 Q7M443]
 +
** [http://www.uniprot.org/uniprot/Q9S7G9 Q9S7G9]
 +
** [http://www.uniprot.org/uniprot/P11220 P11220]
 +
** [http://www.uniprot.org/uniprot/Q59924 Q59924]
 +
** [http://www.uniprot.org/uniprot/Q9FRV0 Q9FRV0]
 +
** [http://www.uniprot.org/uniprot/P36361 P36361]
 +
** [http://www.uniprot.org/uniprot/P32470 P32470]
 +
** [http://www.uniprot.org/uniprot/Q92223 Q92223]
 +
** [http://www.uniprot.org/uniprot/Q7M1R1 Q7M1R1]
 +
** [http://www.uniprot.org/uniprot/P14529 P14529]
 +
** [http://www.uniprot.org/uniprot/Q9S8X7 Q9S8X7]
 +
** [http://www.uniprot.org/uniprot/P11955 P11955]
 +
** [http://www.uniprot.org/uniprot/P11797 P11797]
 +
** [http://www.uniprot.org/uniprot/P05315 P05315]
 +
** [http://www.uniprot.org/uniprot/P08252 P08252]
 +
** [http://www.uniprot.org/uniprot/P24626 P24626]
 +
** [http://www.uniprot.org/uniprot/P25765 P25765]
 +
** [http://www.uniprot.org/uniprot/P27054 P27054]
 +
** [http://www.uniprot.org/uniprot/P17513 P17513]
 +
** [http://www.uniprot.org/uniprot/P17514 P17514]
 +
** [http://www.uniprot.org/uniprot/P29021 P29021]
 +
** [http://www.uniprot.org/uniprot/P24091 P24091]
 +
** [http://www.uniprot.org/uniprot/P29059 P29059]
 +
** [http://www.uniprot.org/uniprot/P29060 P29060]
 +
** [http://www.uniprot.org/uniprot/P29061 P29061]
 +
** [http://www.uniprot.org/uniprot/Q06209 Q06209]
 +
** [http://www.uniprot.org/uniprot/Q43184 Q43184]
 +
** [http://www.uniprot.org/uniprot/P36908 P36908]
 +
** [http://www.uniprot.org/uniprot/Q05638 Q05638]
 +
** [http://www.uniprot.org/uniprot/P29025 P29025]
 +
** [http://www.uniprot.org/uniprot/P29024 P29024]
 +
** [http://www.uniprot.org/uniprot/Q05537 Q05537]
 +
** [http://www.uniprot.org/uniprot/Q05540 Q05540]
 +
** [http://www.uniprot.org/uniprot/Q05539 Q05539]
 +
** [http://www.uniprot.org/uniprot/Q05538 Q05538]
 +
** [http://www.uniprot.org/uniprot/Q41539 Q41539]
 +
** [http://www.uniprot.org/uniprot/Q43294 Q43294]
 +
** [http://www.uniprot.org/uniprot/P52405 P52405]
 +
** [http://www.uniprot.org/uniprot/P42820 P42820]
 +
** [http://www.uniprot.org/uniprot/Q12735 Q12735]
 +
** [http://www.uniprot.org/uniprot/Q43764 Q43764]
 +
** [http://www.uniprot.org/uniprot/Q43765 Q43765]
 +
** [http://www.uniprot.org/uniprot/Q40114 Q40114]
 +
** [http://www.uniprot.org/uniprot/Q43591 Q43591]
 +
** [http://www.uniprot.org/uniprot/Q43151 Q43151]
 +
** [http://www.uniprot.org/uniprot/Q43150 Q43150]
 +
** [http://www.uniprot.org/uniprot/Q42421 Q42421]
 +
** [http://www.uniprot.org/uniprot/Q54276 Q54276]
 +
** [http://www.uniprot.org/uniprot/Q42995 Q42995]
 +
** [http://www.uniprot.org/uniprot/P21226 P21226]
 +
** [http://www.uniprot.org/uniprot/Q43683 Q43683]
 +
** [http://www.uniprot.org/uniprot/Q43684 Q43684]
 +
** [http://www.uniprot.org/uniprot/Q12631 Q12631]
 +
** [http://www.uniprot.org/uniprot/P36907 P36907]
 +
** [http://www.uniprot.org/uniprot/Q09023 Q09023]
 +
** [http://www.uniprot.org/uniprot/Q12713 Q12713]
 +
** [http://www.uniprot.org/uniprot/P52403 P52403]
 +
** [http://www.uniprot.org/uniprot/P52404 P52404]
 +
** [http://www.uniprot.org/uniprot/P52406 P52406]
 +
** [http://www.uniprot.org/uniprot/Q43322 Q43322]
 +
** [http://www.uniprot.org/uniprot/Q42515 Q42515]
 +
** [http://www.uniprot.org/uniprot/Q59141 Q59141]
 +
** [http://www.uniprot.org/uniprot/Q59142 Q59142]
 +
** [http://www.uniprot.org/uniprot/Q59143 Q59143]
 +
** [http://www.uniprot.org/uniprot/Q59144 Q59144]
 +
** [http://www.uniprot.org/uniprot/Q42878 Q42878]
 +
** [http://www.uniprot.org/uniprot/P93154 P93154]
 +
** [http://www.uniprot.org/uniprot/O50076 O50076]
 +
** [http://www.uniprot.org/uniprot/Q9ZSI6 Q9ZSI6]
 +
** [http://www.uniprot.org/uniprot/P93518 P93518]
 +
** [http://www.uniprot.org/uniprot/O24007 O24007]
 +
** [http://www.uniprot.org/uniprot/Q41794 Q41794]
 +
** [http://www.uniprot.org/uniprot/Q41795 Q41795]
 +
** [http://www.uniprot.org/uniprot/Q42970 Q42970]
 +
** [http://www.uniprot.org/uniprot/O04138 O04138]
 +
** [http://www.uniprot.org/uniprot/O04272 O04272]
 +
** [http://www.uniprot.org/uniprot/Q42993 Q42993]
 +
** [http://www.uniprot.org/uniprot/Q42839 Q42839]
 +
** [http://www.uniprot.org/uniprot/O48642 O48642]
 +
** [http://www.uniprot.org/uniprot/Q43852 Q43852]
 +
** [http://www.uniprot.org/uniprot/O81144 O81144]
 +
** [http://www.uniprot.org/uniprot/O81145 O81145]
 +
** [http://www.uniprot.org/uniprot/O65213 O65213]
 +
** [http://www.uniprot.org/uniprot/Q40838 Q40838]
 +
** [http://www.uniprot.org/uniprot/P94084 P94084]
 +
** [http://www.uniprot.org/uniprot/Q43752 Q43752]
 +
** [http://www.uniprot.org/uniprot/Q39656 Q39656]
 +
** [http://www.uniprot.org/uniprot/Q39657 Q39657]
 +
** [http://www.uniprot.org/uniprot/P23472 P23472]
 +
** [http://www.uniprot.org/uniprot/Q39799 Q39799]
 +
** [http://www.uniprot.org/uniprot/Q39785 Q39785]
 +
** [http://www.uniprot.org/uniprot/O17412 O17412]
 +
** [http://www.uniprot.org/uniprot/O04222 O04222]
 +
** [http://www.uniprot.org/uniprot/Q96408 Q96408]
 +
** [http://www.uniprot.org/uniprot/Q96409 Q96409]
 +
** [http://www.uniprot.org/uniprot/Q96410 Q96410]
 +
** [http://www.uniprot.org/uniprot/Q96411 Q96411]
 +
** [http://www.uniprot.org/uniprot/Q84577 Q84577]
 +
** [http://www.uniprot.org/uniprot/P92013 P92013]
 +
** [http://www.uniprot.org/uniprot/P96156 P96156]
 +
** [http://www.uniprot.org/uniprot/P75020 P75020]
 +
** [http://www.uniprot.org/uniprot/Q9YMQ7 Q9YMQ7]
 +
** [http://www.uniprot.org/uniprot/Q9ZIX4 Q9ZIX4]
 +
** [http://www.uniprot.org/uniprot/Q11174 Q11174]
 +
** [http://www.uniprot.org/uniprot/O44079 O44079]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=thymidylate synthase}}
+
{{#set: common-name=chitinase}}
−
{{#set: ec-number=ec-2.1.1.45}}
+
{{#set: ec-number=ec-3.2.1.14}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 3.2.1.14-RXN

  • direction:
    • left-to-right
  • common-name:
    • chitinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7822, chitin degradation III (Serratia):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6902, chitin degradation II (Vibrio):
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6855, chitin degradation I (archaea):
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3.2.1.14-RXN&oldid=142833"