Difference between revisions of "3.2.1.21-RXN"

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(Created page with "Category:reaction == Reaction GLUTDECARBOX-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.15 ec-4.1.1.15] == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN1G-1084 == * direction: ** left-to-right * common-name: ** cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase * ec-number: ** [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTDECARBOX-RXN ==
+
== Reaction RXN1G-1084 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.15 ec-4.1.1.15]
+
** [http://enzyme.expasy.org/EC/4.2.1.m1 ec-4.2.1.m1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[cis-delta19-3-hydroxyC38-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[trans-D2-cis-D19-C38-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12405]]
+
* Gene: [[SJ10275]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1305]], L-glutamate degradation IX (via 4-aminobutanoate):
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''26''' reactions found over '''182''' reactions in the full pathway
−
* [[GLUDEG-I-PWY]], GABA shunt:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-4321]], L-glutamate degradation IV:
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17786 17786]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00261 R00261]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P20228 P20228]
 
−
** [http://www.uniprot.org/uniprot/Q05329 Q05329]
 
−
** [http://www.uniprot.org/uniprot/P18088 P18088]
 
−
** [http://www.uniprot.org/uniprot/P14748 P14748]
 
−
** [http://www.uniprot.org/uniprot/Q07346 Q07346]
 
−
** [http://www.uniprot.org/uniprot/Q99259 Q99259]
 
−
** [http://www.uniprot.org/uniprot/P69910 P69910]
 
−
** [http://www.uniprot.org/uniprot/Q9CG20 Q9CG20]
 
−
** [http://www.uniprot.org/uniprot/P48321 P48321]
 
−
** [http://www.uniprot.org/uniprot/P48319 P48319]
 
−
** [http://www.uniprot.org/uniprot/Q05683 Q05683]
 
−
** [http://www.uniprot.org/uniprot/Q24062 Q24062]
 
−
** [http://www.uniprot.org/uniprot/P69908 P69908]
 
−
** [http://www.uniprot.org/uniprot/P48320 P48320]
 
−
** [http://www.uniprot.org/uniprot/Q59956 Q59956]
 
−
** [http://www.uniprot.org/uniprot/P48318 P48318]
 
−
** [http://www.uniprot.org/uniprot/Q49854 Q49854]
 
−
** [http://www.uniprot.org/uniprot/Q49855 Q49855]
 
−
** [http://www.uniprot.org/uniprot/Q49863 Q49863]
 
−
** [http://www.uniprot.org/uniprot/O81101 O81101]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-4.1.1.15}}
+
{{#set: common-name=cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase}}
 +
{{#set: ec-number=ec-4.2.1.m1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:16, 14 January 2021

Reaction RXN1G-1084

  • direction:
    • left-to-right
  • common-name:
    • cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "cis-delta19-3-hydroxyc38:1-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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