Difference between revisions of "3.2.1.38-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7230 PWY-7230] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
(Created page with "Category:reaction == Reaction RXN66-469 == * direction: ** left-to-right * common-name: ** 3-methyl-branched fatty acyl-coa ligase ** 3-methyl-branched 2,3,4-saturated fat...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7230 PWY-7230] ==
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== Reaction RXN66-469 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** left-to-right
 
* common-name:
 
* common-name:
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** ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
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** 3-methyl-branched fatty acyl-coa ligase
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== Reaction(s) found ==
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** 3-methyl-branched 2,3,4-saturated fatty acyl-coa ligase
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* [[RXN-13685]]
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** long-chain fatty acid-coa ligase
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* [[RXN3O-102]]
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* ec-number:
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* [[RXN3O-54]]
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** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-73 RXN3O-73]
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* 1 [[3-Methyl-Saturated-Fatty-Acids]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-75 RXN3O-75]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-20171 RXN-20171]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14291 RXN-14291]
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* Gene: [[SJ08691]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14292 RXN-14292]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-20172 RXN-20172]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-12 RXN3O-12]
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** Category: [[orthology]]
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{{#set: taxonomic-range=tax-4751}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)}}
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* Gene: [[SJ13972]]
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{{#set: nb reaction found=3}}
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** Category: [[annotation]]
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{{#set: completion rate=0.33}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=9}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ08690]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ03650]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ08692]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ05591]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY66-387]], &beta;-methyl-branched fatty acid &alpha;-oxidation:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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{{#set: direction=left-to-right}}
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{{#set: common-name=long-chain fatty acid-coa ligase|3-methyl-branched 2,3,4-saturated fatty acyl-coa ligase|3-methyl-branched fatty acyl-coa ligase}}
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{{#set: ec-number=ec-6.2.1.3}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:45, 18 December 2020

Reaction RXN66-469

  • direction:
    • left-to-right
  • common-name:
    • 3-methyl-branched fatty acyl-coa ligase
    • 3-methyl-branched 2,3,4-saturated fatty acyl-coa ligase
    • long-chain fatty acid-coa ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-387, β-methyl-branched fatty acid α-oxidation:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3.2.1.38-RXN&oldid=51307"