Difference between revisions of "3.2.1.58-RXN"

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(Created page with "Category:reaction == Reaction GLYCEROL-DEHYDRATASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.30 ec-4.2.1.30] == Reaction form...")
(Created page with "Category:reaction == Reaction RXN-16044 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.23 ec-2.3.1.23] == Reaction formula == * 1 CP...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYCEROL-DEHYDRATASE-RXN ==
+
== Reaction RXN-16044 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.30 ec-4.2.1.30]
+
** [http://enzyme.expasy.org/EC/2.3.1.23 ec-2.3.1.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYCEROL]][c] '''=>''' 1 [[HYDROXYPROPANAL]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-14407]][c] '''+''' 1 [[Glycerolipids]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17283]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15896]]
+
* Gene: [[SJ13643]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09127]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22477]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
+
* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes):
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6130]], glycerol degradation III:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19766 19766]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01047 R01047]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-4.2.1.30}}
+
{{#set: ec-number=ec-2.3.1.23}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:02, 5 January 2021

Reaction RXN-16044

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes):
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3.2.1.58-RXN&oldid=62628"