Difference between revisions of "3.2.1.58-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-969 == * direction: ** left-to-right * common-name: ** (s)-2-hydroxy-acid oxidase ** glycolate oxidase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction RXN-9634 == * direction: ** left-to-right * common-name: ** 3-hydroxystearoyl-[acyl-carrier protein] dehydratase * ec-number: ** [http://enzy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-969 ==
+
== Reaction RXN-9634 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** (s)-2-hydroxy-acid oxidase
+
** 3-hydroxystearoyl-[acyl-carrier protein] dehydratase
−
** glycolate oxidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.3.15 ec-1.1.3.15]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYCOLLATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[GLYOX]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
* 1 [[R-3-hydroxystearoyl-ACPs]][c] '''=>''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ10275]]
−
* Gene: [[SJ20716]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06498]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21294]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ22039]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17283]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-181]], photorespiration:
+
* [[PWY3O-355]], stearate biosynthesis III (fungi):
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25312 25312]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00475 R00475]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=(s)-2-hydroxy-acid oxidase|glycolate oxidase}}
+
{{#set: common-name=3-hydroxystearoyl-[acyl-carrier protein] dehydratase}}
−
{{#set: ec-number=ec-1.1.3.15}}
+
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.86}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:15, 14 January 2021

Reaction RXN-9634

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxystearoyl-[acyl-carrier protein] dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3O-355, stearate biosynthesis III (fungi):
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5989, stearate biosynthesis II (bacteria and plants):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-hydroxystearoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3.2.1.58-RXN&oldid=88685"