Difference between revisions of "3.2.1.8-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] **...")
(Created page with "Category:reaction == Reaction 3.2.1.8-RXN == * direction: ** left-to-right * common-name: ** endo-1,4-beta-xylanase ** endo-1,4-β-xylanase * ec-number: ** [http://enz...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177] ==
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== Reaction 3.2.1.8-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
 
 
* common-name:
 
* common-name:
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** utp and ctp dephosphorylation ii
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** endo-1,4-beta-xylanase
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== Reaction(s) found ==
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** endo-1,4-β-xylanase
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* [[CTPSYN-RXN]]
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* ec-number:
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* [[RXN-12199]]
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** [http://enzyme.expasy.org/EC/3.2.1.8 ec-3.2.1.8]
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* [[RXN-12200]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[1-4-beta-Xylan]][c] '''+''' n [[WATER]][c] '''=>''' n [[1-4-D-xylooligosaccharides]][c]
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All reactions of this pathways are in present
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-2759|tax-2}}
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* Gene: [[SJ06513]]
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{{#set: common-name=utp and ctp dephosphorylation ii}}
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** Category: [[annotation]]
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{{#set: nb reaction found=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=1.0}}
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** Category: [[orthology]]
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{{#set: nb total reaction=3}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10590]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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== Pathway(s) ==
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* [[PWY-6784]], cellulose and hemicellulose degradation (cellulolosome):
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** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR115402
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P10478 P10478]
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** [http://www.uniprot.org/uniprot/Q9R5M7 Q9R5M7]
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** [http://www.uniprot.org/uniprot/Q7M519 Q7M519]
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** [http://www.uniprot.org/uniprot/Q7M520 Q7M520]
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** [http://www.uniprot.org/uniprot/P35809 P35809]
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** [http://www.uniprot.org/uniprot/Q7M513 Q7M513]
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** [http://www.uniprot.org/uniprot/Q7M0W8 Q7M0W8]
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** [http://www.uniprot.org/uniprot/P23556 P23556]
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** [http://www.uniprot.org/uniprot/Q7M4V8 Q7M4V8]
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** [http://www.uniprot.org/uniprot/Q9R5M6 Q9R5M6]
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** [http://www.uniprot.org/uniprot/Q7M0X0 Q7M0X0]
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** [http://www.uniprot.org/uniprot/Q7M0W9 Q7M0W9]
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** [http://www.uniprot.org/uniprot/P45703 P45703]
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** [http://www.uniprot.org/uniprot/P18429 P18429]
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** [http://www.uniprot.org/uniprot/P40943 P40943]
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** [http://www.uniprot.org/uniprot/P54865 P54865]
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** [http://www.uniprot.org/uniprot/Q00177 Q00177]
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** [http://www.uniprot.org/uniprot/P79046 P79046]
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** [http://www.uniprot.org/uniprot/O83007 O83007]
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** [http://www.uniprot.org/uniprot/Q9UUQ2 Q9UUQ2]
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** [http://www.uniprot.org/uniprot/Q9HFA4 Q9HFA4]
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** [http://www.uniprot.org/uniprot/Q9F1V3 Q9F1V3]
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** [http://www.uniprot.org/uniprot/Q9AJR9 Q9AJR9]
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** [http://www.uniprot.org/uniprot/P29417 P29417]
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** [http://www.uniprot.org/uniprot/P26514 P26514]
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** [http://www.uniprot.org/uniprot/P26220 P26220]
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** [http://www.uniprot.org/uniprot/Q9R5P8 Q9R5P8]
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** [http://www.uniprot.org/uniprot/Q9R5P9 Q9R5P9]
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** [http://www.uniprot.org/uniprot/P09850 P09850]
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** [http://www.uniprot.org/uniprot/P14768 P14768]
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** [http://www.uniprot.org/uniprot/P45796 P45796]
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** [http://www.uniprot.org/uniprot/P29126 P29126]
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** [http://www.uniprot.org/uniprot/P29127 P29127]
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** [http://www.uniprot.org/uniprot/Q02244 Q02244]
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** [http://www.uniprot.org/uniprot/P40944 P40944]
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** [http://www.uniprot.org/uniprot/P55334 P55334]
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** [http://www.uniprot.org/uniprot/Q56013 Q56013]
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** [http://www.uniprot.org/uniprot/Q59256 Q59256]
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** [http://www.uniprot.org/uniprot/P55328 P55328]
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** [http://www.uniprot.org/uniprot/Q01426 Q01426]
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** [http://www.uniprot.org/uniprot/P55331 P55331]
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** [http://www.uniprot.org/uniprot/Q59257 Q59257]
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** [http://www.uniprot.org/uniprot/P51584 P51584]
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** [http://www.uniprot.org/uniprot/P49942 P49942]
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** [http://www.uniprot.org/uniprot/P55333 P55333]
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** [http://www.uniprot.org/uniprot/P55332 P55332]
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** [http://www.uniprot.org/uniprot/Q59790 Q59790]
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** [http://www.uniprot.org/uniprot/Q59300 Q59300]
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** [http://www.uniprot.org/uniprot/Q59301 Q59301]
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** [http://www.uniprot.org/uniprot/Q59674 Q59674]
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** [http://www.uniprot.org/uniprot/Q59675 Q59675]
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** [http://www.uniprot.org/uniprot/Q60037 Q60037]
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** [http://www.uniprot.org/uniprot/Q12579 Q12579]
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** [http://www.uniprot.org/uniprot/Q12580 Q12580]
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** [http://www.uniprot.org/uniprot/Q60046 Q60046]
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** [http://www.uniprot.org/uniprot/P93185 P93185]
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** [http://www.uniprot.org/uniprot/P93186 P93186]
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** [http://www.uniprot.org/uniprot/P93187 P93187]
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** [http://www.uniprot.org/uniprot/Q12603 Q12603]
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** [http://www.uniprot.org/uniprot/O69230 O69230]
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** [http://www.uniprot.org/uniprot/O30426 O30426]
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** [http://www.uniprot.org/uniprot/O52373 O52373]
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** [http://www.uniprot.org/uniprot/Q59278 Q59278]
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** [http://www.uniprot.org/uniprot/Q9RKN6 Q9RKN6]
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** [http://www.uniprot.org/uniprot/P00694 P00694]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=endo-1,4-beta-xylanase|endo-1,4-&beta;-xylanase}}
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{{#set: ec-number=ec-3.2.1.8}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 3.2.1.8-RXN

  • direction:
    • left-to-right
  • common-name:
    • endo-1,4-beta-xylanase
    • endo-1,4-β-xylanase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6784, cellulose and hemicellulose degradation (cellulolosome):
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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