Difference between revisions of "3.4.11.1-RXN"
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(Created page with "Category:reaction == Reaction RXN-17114 == * direction: ** left-to-right * common-name: ** (2e,6z,9z,12z,15z,18z)-tetracosahexaenoyl-coa hydratase ** enoyl-coa hydratase *...") |
(Created page with "Category:reaction == Reaction ACETOLACTREDUCTOISOM-RXN == * direction: ** left-to-right * common-name: ** 2,3-dihydroxy-isovalerate:nadp+ oxidoreductase (isomerizing) * ec...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction ACETOLACTREDUCTOISOM-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** 2,3-dihydroxy-isovalerate:nadp+ oxidoreductase (isomerizing) |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.86 ec-1.1.1.86] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13357]][c] '''+''' 1 [[NADP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ10245]] | |
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− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[VALSYN-PWY]], L-valine biosynthesis: |
− | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
+ | * [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22071 22071] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R04439 R04439] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P06168 P06168] | ||
+ | ** [http://www.uniprot.org/uniprot/P44822 P44822] | ||
+ | ** [http://www.uniprot.org/uniprot/O25097 O25097] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02138 Q02138] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57179 Q57179] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTI3 Q9JTI3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PHN5 Q9PHN5] | ||
+ | ** [http://www.uniprot.org/uniprot/P05793 P05793] | ||
+ | ** [http://www.uniprot.org/uniprot/P38674 P38674] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59500 Q59500] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01292 Q01292] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05758 Q05758] | ||
+ | ** [http://www.uniprot.org/uniprot/O82043 O82043] | ||
+ | ** [http://www.uniprot.org/uniprot/P78827 P78827] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=2,3-dihydroxy-isovalerate:nadp+ oxidoreductase (isomerizing)}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.1.1.86}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
− | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:00, 5 January 2021
Contents
Reaction ACETOLACTREDUCTOISOM-RXN
- direction:
- left-to-right
- common-name:
- 2,3-dihydroxy-isovalerate:nadp+ oxidoreductase (isomerizing)
- ec-number:
Reaction formula
- 1 2-ACETO-LACTATE[c] + 1 NADPH[c] + 1 PROTON[c] => 1 CPD-13357[c] + 1 NADP[c]
Gene(s) associated with this reaction
- Gene: SJ10245
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- VALSYN-PWY, L-valine biosynthesis:
- 4 reactions found over 4 reactions in the full pathway
- PWY-7111, pyruvate fermentation to isobutanol (engineered):
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: