Difference between revisions of "3.4.11.21-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-OXOPROLINASE-ATP-HYDROLYSING-RXN 5-OXOPROLINASE-ATP-HYDROLYSING-RXN] == * direction: ** left-to-r...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == * direction: ** left-to-right * e...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
− | |||
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/1.3.1.98 ec-1.3.1.98] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-N-ACETYLMURAMATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | |
− | + | * Gene: [[SJ03311]] | |
− | * | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | |||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21113]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21111]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03315]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21114]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21294]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ19720]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ20537]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387] |
− | ** ''' | + | ** '''2''' reactions found over '''8''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7953]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7953 PWY-7953] |
− | ** ''' | + | ** '''2''' reactions found over '''8''' reactions in the full pathway |
+ | * [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386] | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY0-1261]], anhydromuropeptides recycling I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261] | ||
+ | ** '''3''' reactions found over '''12''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
− | |||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12250 12250] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01] |
+ | ** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28] | ||
+ | ** [http://www.uniprot.org/uniprot/P44605 P44605] | ||
+ | ** [http://www.uniprot.org/uniprot/P08373 P08373] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | + | {{#set: ec-number=ec-1.3.1.98}} | |
− | {{#set: ec-number=ec-3. | + | {{#set: nb gene associated=8}} |
− | {{#set: nb gene associated= | + | {{#set: nb pathway associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: reconstruction category=orthology}} |
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction tool=pantograph}} |
− | {{#set: reconstruction tool=pantograph | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} |
Revision as of 09:30, 27 August 2019
Contents
Reaction UDPNACETYLMURAMATEDEHYDROG-RXN
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 NADPH[c] + 1 PROTON[c] + 1 UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE[c] => 1 NADP[c] + 1 UDP-N-ACETYLMURAMATE[c]
Gene(s) associated with this reaction
- Gene: SJ03311
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21113
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21111
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ03315
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21114
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21294
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ19720
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ20537
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6387, UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): PWY-6387
- 2 reactions found over 8 reactions in the full pathway
- PWY-7953, UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing): PWY-7953
- 2 reactions found over 8 reactions in the full pathway
- PWY-6386, UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): PWY-6386
- 2 reactions found over 8 reactions in the full pathway
- PWY0-1261, anhydromuropeptides recycling I: PWY0-1261
- 3 reactions found over 12 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links