Difference between revisions of "3.4.13.18-RXN"

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(Created page with "Category:reaction == Reaction DIPHTINE--AMMONIA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** diphthine—ammonia ligase * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction 3.4.13.18-RXN == * direction: ** left-to-right * common-name: ** cytosolic dipeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.13.18...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIPHTINE--AMMONIA-LIGASE-RXN ==
+
== Reaction 3.4.13.18-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** diphthine—ammonia ligase
+
** cytosolic dipeptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.1.14 ec-6.3.1.14]
+
** [http://enzyme.expasy.org/EC/3.4.13.18 ec-3.4.13.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[DIPHTINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[DIPEPTIDES]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Amino-Acids-20]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03200]]
+
* Gene: [[SJ11013]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6482]], diphthamide biosynthesis I (archaea):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7546]], diphthamide biosynthesis II (eukaryotes):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19754 19754]
+
** [http://www.uniprot.org/uniprot/Q48558 Q48558]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diphthine—ammonia ligase}}
+
{{#set: common-name=cytosolic dipeptidase}}
−
{{#set: ec-number=ec-6.3.1.14}}
+
{{#set: ec-number=ec-3.4.13.18}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction 3.4.13.18-RXN

  • direction:
    • left-to-right
  • common-name:
    • cytosolic dipeptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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