Difference between revisions of "3.4.13.18-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FESO3OXI-RXN FESO3OXI-RXN] == * direction: ** reversible == Reaction formula == * 2 FE+3[c] '''...")
(Created page with "Category:reaction == Reaction DIPHTINE--AMMONIA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** diphthine—ammonia ligase * ec-number: ** [http://enzyme...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FESO3OXI-RXN FESO3OXI-RXN] ==
+
== Reaction DIPHTINE--AMMONIA-LIGASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** diphthine—ammonia ligase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.3.1.14 ec-6.3.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[FE+3]][c] '''+''' 1 [[SO3]][c] '''+''' 1 [[WATER]][c] '''<=>''' 2 [[FE+2]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SULFATE]][c]
+
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[DIPHTINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ03200]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[FESULFOX-PWY]], sulfur oxidation II (Fe+3-dependent): [http://metacyc.org/META/NEW-IMAGE?object=FESULFOX-PWY FESULFOX-PWY]
+
* [[PWY-6482]], diphthamide biosynthesis I (archaea):
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7546]], diphthamide biosynthesis II (eukaryotes):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: nb gene associated=0}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19754 19754]
−
{{#set: nb pathway associated=1}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
−
{{#set: reconstruction tool=meneco}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: common-name=diphthine&mdash;ammonia ligase}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: ec-number=ec-6.3.1.14}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:42, 18 December 2020

Reaction DIPHTINE--AMMONIA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • diphthine—ammonia ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6482, diphthamide biosynthesis I (archaea):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7546, diphthamide biosynthesis II (eukaryotes):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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