Difference between revisions of "3.4.13.9-RXN"

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(Created page with "Category:reaction == Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** 3-hydroxyisobutyrate dehydrogenase * ec-number: **...")
(Created page with "Category:reaction == Reaction 3.4.13.9-RXN == * direction: ** left-to-right * common-name: ** xaa-pro dipeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.13.9 ec-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN ==
+
== Reaction 3.4.13.9-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-hydroxyisobutyrate dehydrogenase
+
** xaa-pro dipeptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.31 ec-1.1.1.31]
+
** [http://enzyme.expasy.org/EC/3.4.13.9 ec-3.4.13.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12175]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Dipeptides-With-Proline-Carboxy]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[PRO]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14331]]
+
* Gene: [[SJ11316]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21390]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07211]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16180]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03584]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[VALDEG-PWY]], L-valine degradation I:
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR100663
+
* METANETX-RXN : MNXR115443
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17682 17682]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02047 R02047]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P29266 P29266]
+
** [http://www.uniprot.org/uniprot/Q9CF32 Q9CF32]
−
** [http://www.uniprot.org/uniprot/P28811 P28811]
+
** [http://www.uniprot.org/uniprot/O67493 O67493]
−
** [http://www.uniprot.org/uniprot/Q8XAE4 Q8XAE4]
+
** [http://www.uniprot.org/uniprot/O27062 O27062]
−
** [http://www.uniprot.org/uniprot/Q55702 Q55702]
+
** [http://www.uniprot.org/uniprot/O25681 O25681]
−
** [http://www.uniprot.org/uniprot/Q9XTI0 Q9XTI0]
+
** [http://www.uniprot.org/uniprot/Q58216 Q58216]
 +
** [http://www.uniprot.org/uniprot/P21165 P21165]
 +
** [http://www.uniprot.org/uniprot/P46545 P46545]
 +
** [http://www.uniprot.org/uniprot/P75313 P75313]
 +
** [http://www.uniprot.org/uniprot/P81535 P81535]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-hydroxyisobutyrate dehydrogenase}}
+
{{#set: common-name=xaa-pro dipeptidase}}
−
{{#set: ec-number=ec-1.1.1.31}}
+
{{#set: ec-number=ec-3.4.13.9}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction 3.4.13.9-RXN

  • direction:
    • left-to-right
  • common-name:
    • xaa-pro dipeptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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