Difference between revisions of "3.4.17.19-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?...")
(Created page with "Category:reaction == Reaction ASPARAGINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** asparagine-trna ligase * ec-number: ** [http://enzyme.expasy.o...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY] ==
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== Reaction ASPARAGINE--TRNA-LIGASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
 
 
* common-name:
 
* common-name:
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** l-methionine degradation i (to l-homocysteine)
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** asparagine-trna ligase
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== Reaction(s) found ==
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* ec-number:
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* [[ADENOSYLHOMOCYSTEINASE-RXN]]
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** [http://enzyme.expasy.org/EC/6.1.1.22 ec-6.1.1.22]
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* [[S-ADENMETSYN-RXN]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-2759|tax-2157|tax-2}}
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* Gene: [[SJ20233]]
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{{#set: common-name=l-methionine degradation i (to l-homocysteine)}}
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** Category: [[annotation]]
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{{#set: nb reaction found=2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.67}}
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* Gene: [[SJ18954]]
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{{#set: nb total reaction=3}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11181 11181]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P39772 P39772]
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** [http://www.uniprot.org/uniprot/O57980 O57980]
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** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
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** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
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** [http://www.uniprot.org/uniprot/P47359 P47359]
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** [http://www.uniprot.org/uniprot/O51128 O51128]
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** [http://www.uniprot.org/uniprot/O83618 O83618]
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** [http://www.uniprot.org/uniprot/O58008 O58008]
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** [http://www.uniprot.org/uniprot/O96198 O96198]
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** [http://www.uniprot.org/uniprot/P54262 P54262]
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** [http://www.uniprot.org/uniprot/P75521 P75521]
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** [http://www.uniprot.org/uniprot/Q48966 Q48966]
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** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
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{{#set: direction=left-to-right}}
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{{#set: common-name=asparagine-trna ligase}}
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{{#set: ec-number=ec-6.1.1.22}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:45, 18 December 2020

Reaction ASPARAGINE--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • asparagine-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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