Difference between revisions of "3.4.21.53-RXN"

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(Created page with "Category:reaction == Reaction KETOACYLCOATHIOL-RXN == * direction: ** left-to-right * common-name: ** acetyl-coa c-acyltransferase ** 3-ketoacyl-coa thiolase * ec-number:...")
(Created page with "Category:reaction == Reaction 3.4.21.53-RXN == * direction: ** left-to-right * common-name: ** serine protease * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.53 ec-3....")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction KETOACYLCOATHIOL-RXN ==
+
== Reaction 3.4.21.53-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acetyl-coa c-acyltransferase
+
** serine protease
−
** 3-ketoacyl-coa thiolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/3.4.21.53 ec-3.4.21.53]
−
* synonymous:
 
−
** beta-ketothiolase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21818]]
+
* Gene: [[SJ07766]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08827]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16470]]
+
* Gene: [[SJ04794]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21817]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14898]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ09371]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7288]], fatty acid β-oxidation VII (yeast peroxisome):
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5136]], fatty acid β-oxidation II (plant peroxisome):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FAO-PWY]], fatty acid β-oxidation I (generic):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid β-oxidation VI (mammalian peroxisome):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21566 21566]
 
−
* PIR:
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P77525 P77525]
+
** [http://www.uniprot.org/uniprot/P36774 P36774]
−
** [http://www.uniprot.org/uniprot/P28790 P28790]
+
** [http://www.uniprot.org/uniprot/P36773 P36773]
−
** [http://www.uniprot.org/uniprot/P27796 P27796]
+
** [http://www.uniprot.org/uniprot/P43864 P43864]
−
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
+
** [http://www.uniprot.org/uniprot/O66605 O66605]
−
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
+
** [http://www.uniprot.org/uniprot/Q9ZD92 Q9ZD92]
−
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
+
** [http://www.uniprot.org/uniprot/Q9ZJL3 Q9ZJL3]
−
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
+
** [http://www.uniprot.org/uniprot/Q9X1W8 Q9X1W8]
−
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
+
** [http://www.uniprot.org/uniprot/O83536 O83536]
−
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
+
** [http://www.uniprot.org/uniprot/Q9Z9F4 Q9Z9F4]
−
** [http://www.uniprot.org/uniprot/P21151 P21151]
+
** [http://www.uniprot.org/uniprot/P55995 P55995]
−
** [http://www.uniprot.org/uniprot/P09110 P09110]
+
** [http://www.uniprot.org/uniprot/O84348 O84348]
−
** [http://www.uniprot.org/uniprot/P13437 P13437]
+
** [http://www.uniprot.org/uniprot/P47481 P47481]
−
** [http://www.uniprot.org/uniprot/P21775 P21775]
+
** [http://www.uniprot.org/uniprot/O51558 O51558]
−
** [http://www.uniprot.org/uniprot/P07871 P07871]
+
** [http://www.uniprot.org/uniprot/O69300 O69300]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/Q59185 Q59185]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
+
** [http://www.uniprot.org/uniprot/Q9JUC0 Q9JUC0]
 +
** [http://www.uniprot.org/uniprot/P37945 P37945]
 +
** [http://www.uniprot.org/uniprot/P77810 P77810]
 +
** [http://www.uniprot.org/uniprot/P46067 P46067]
 +
** [http://www.uniprot.org/uniprot/P78025 P78025]
 +
** [http://www.uniprot.org/uniprot/Q59511 Q59511]
 +
** [http://www.uniprot.org/uniprot/P0A9M0 P0A9M0]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-ketoacyl-coa thiolase|acetyl-coa c-acyltransferase}}
+
{{#set: common-name=serine protease}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: ec-number=ec-3.4.21.53}}
−
{{#set: synonymous=beta-ketothiolase}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 3.4.21.53-RXN

  • direction:
    • left-to-right
  • common-name:
    • serine protease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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