Difference between revisions of "3.4.21.53-RXN"

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(Created page with "Category:reaction == Reaction PROPIONYL-COA-CARBOXY-RXN == * direction: ** reversible * common-name: ** propionyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction 3.4.21.53-RXN == * direction: ** left-to-right * common-name: ** serine protease * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.53 ec-3....")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PROPIONYL-COA-CARBOXY-RXN ==
+
== Reaction 3.4.21.53-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** propionyl-coa carboxylase
+
** serine protease
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3]
+
** [http://enzyme.expasy.org/EC/3.4.21.53 ec-3.4.21.53]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12870]]
+
* Gene: [[SJ07766]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08827]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ04794]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08104]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PROPIONMET-PWY]], propanoyl CoA degradation I:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
+
** [http://www.uniprot.org/uniprot/P36774 P36774]
−
** [http://www.uniprot.org/uniprot/P07633 P07633]
+
** [http://www.uniprot.org/uniprot/P36773 P36773]
−
** [http://www.uniprot.org/uniprot/P05165 P05165]
+
** [http://www.uniprot.org/uniprot/P43864 P43864]
−
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
+
** [http://www.uniprot.org/uniprot/O66605 O66605]
−
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
+
** [http://www.uniprot.org/uniprot/Q9ZD92 Q9ZD92]
−
** [http://www.uniprot.org/uniprot/O24789 O24789]
+
** [http://www.uniprot.org/uniprot/Q9ZJL3 Q9ZJL3]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/Q9X1W8 Q9X1W8]
−
{{#set: common-name=propionyl-coa carboxylase}}
+
** [http://www.uniprot.org/uniprot/O83536 O83536]
−
{{#set: ec-number=ec-6.4.1.3}}
+
** [http://www.uniprot.org/uniprot/Q9Z9F4 Q9Z9F4]
−
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/P55995 P55995]
−
{{#set: nb pathway associated=5}}
+
** [http://www.uniprot.org/uniprot/O84348 O84348]
−
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P47481 P47481]
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
** [http://www.uniprot.org/uniprot/O51558 O51558]
 +
** [http://www.uniprot.org/uniprot/O69300 O69300]
 +
** [http://www.uniprot.org/uniprot/Q59185 Q59185]
 +
** [http://www.uniprot.org/uniprot/Q9JUC0 Q9JUC0]
 +
** [http://www.uniprot.org/uniprot/P37945 P37945]
 +
** [http://www.uniprot.org/uniprot/P77810 P77810]
 +
** [http://www.uniprot.org/uniprot/P46067 P46067]
 +
** [http://www.uniprot.org/uniprot/P78025 P78025]
 +
** [http://www.uniprot.org/uniprot/Q59511 Q59511]
 +
** [http://www.uniprot.org/uniprot/P0A9M0 P0A9M0]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=serine protease}}
 +
{{#set: ec-number=ec-3.4.21.53}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 3.4.21.53-RXN

  • direction:
    • left-to-right
  • common-name:
    • serine protease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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