Difference between revisions of "3.4.21.92-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-21...")
(Created page with "Category:reaction == Reaction 3.4.21.92-RXN == * direction: ** left-to-right * common-name: ** atp-dependent clp protease * ec-number: ** [http://enzyme.expasy.org/EC/3.4....")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] ==
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== Reaction 3.4.21.92-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** trans, trans-farnesyl diphosphate biosynthesis
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** atp-dependent clp protease
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== Reaction(s) found ==
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* ec-number:
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* [[FPPSYN-RXN]]
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** [http://enzyme.expasy.org/EC/3.4.21.92 ec-3.4.21.92]
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* [[GPPSYN-RXN]]
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== Reaction formula ==
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* [[IPPISOM-RXN]]
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* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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All reactions of this pathways are in present
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: taxonomic-range=tax-2759|tax-2157|tax-2}}
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* Gene: [[SJ17425]]
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{{#set: common-name=trans, trans-farnesyl diphosphate biosynthesis}}
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** Category: [[annotation]]
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{{#set: nb reaction found=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=1.0}}
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** Category: [[orthology]]
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{{#set: nb total reaction=3}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10018]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ16999]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ00782]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18299]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 +
== Pathway(s) ==
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P12208 P12208]
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** [http://www.uniprot.org/uniprot/Q9JU33 Q9JU33]
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** [http://www.uniprot.org/uniprot/Q9PE41 Q9PE41]
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** [http://www.uniprot.org/uniprot/P0A6G7 P0A6G7]
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** [http://www.uniprot.org/uniprot/P56156 P56156]
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** [http://www.uniprot.org/uniprot/P80244 P80244]
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** [http://www.uniprot.org/uniprot/O51556 O51556]
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** [http://www.uniprot.org/uniprot/O67357 O67357]
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** [http://www.uniprot.org/uniprot/O83520 O83520]
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** [http://www.uniprot.org/uniprot/Q9HYR9 Q9HYR9]
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** [http://www.uniprot.org/uniprot/P63783 P63783]
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** [http://www.uniprot.org/uniprot/O84712 O84712]
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** [http://www.uniprot.org/uniprot/P43867 P43867]
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** [http://www.uniprot.org/uniprot/O51698 O51698]
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** [http://www.uniprot.org/uniprot/P0A526 P0A526]
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** [http://www.uniprot.org/uniprot/Q9PLM0 Q9PLM0]
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** [http://www.uniprot.org/uniprot/Q9K709 Q9K709]
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** [http://www.uniprot.org/uniprot/Q9WZF9 Q9WZF9]
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** [http://www.uniprot.org/uniprot/Q9RSZ7 Q9RSZ7]
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** [http://www.uniprot.org/uniprot/Q9I2U1 Q9I2U1]
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** [http://www.uniprot.org/uniprot/Q9K888 Q9K888]
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** [http://www.uniprot.org/uniprot/P38002 P38002]
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** [http://www.uniprot.org/uniprot/Q9Z759 Q9Z759]
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** [http://www.uniprot.org/uniprot/Q9Z832 Q9Z832]
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** [http://www.uniprot.org/uniprot/P54413 P54413]
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** [http://www.uniprot.org/uniprot/Q9KQS6 Q9KQS6]
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** [http://www.uniprot.org/uniprot/Q9ZD29 Q9ZD29]
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** [http://www.uniprot.org/uniprot/Q9ZL50 Q9ZL50]
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** [http://www.uniprot.org/uniprot/P12209 P12209]
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** [http://www.uniprot.org/uniprot/Q7M2F6 Q7M2F6]
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** [http://www.uniprot.org/uniprot/P24064 P24064]
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** [http://www.uniprot.org/uniprot/P36387 P36387]
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** [http://www.uniprot.org/uniprot/P26567 P26567]
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** [http://www.uniprot.org/uniprot/P48883 P48883]
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** [http://www.uniprot.org/uniprot/Q16740 Q16740]
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** [http://www.uniprot.org/uniprot/P54416 P54416]
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** [http://www.uniprot.org/uniprot/Q59993 Q59993]
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** [http://www.uniprot.org/uniprot/P74467 P74467]
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** [http://www.uniprot.org/uniprot/P30063 P30063]
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** [http://www.uniprot.org/uniprot/Q36863 Q36863]
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** [http://www.uniprot.org/uniprot/Q42886 Q42886]
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** [http://www.uniprot.org/uniprot/P56317 P56317]
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** [http://www.uniprot.org/uniprot/P41609 P41609]
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** [http://www.uniprot.org/uniprot/Q9X7R9 Q9X7R9]
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** [http://www.uniprot.org/uniprot/O48931 O48931]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=atp-dependent clp protease}}
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{{#set: ec-number=ec-3.4.21.92}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 3.4.21.92-RXN

  • direction:
    • left-to-right
  • common-name:
    • atp-dependent clp protease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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