Difference between revisions of "3.4.22.1-RXN"

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(Created page with "Category:reaction == Reaction RXN-17730 == * direction: ** left-to-right * common-name: ** 2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase ** phosphatidate phospha...")
(Created page with "Category:reaction == Reaction 3.4.22.1-RXN == * direction: ** left-to-right * common-name: ** cathepsin b * ec-number: ** [http://enzyme.expasy.org/EC/3.4.22.1 ec-3.4.22.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-17730 ==
+
== Reaction 3.4.22.1-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase
+
** cathepsin b
−
** phosphatidate phosphatase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.4 ec-3.1.3.4]
+
** [http://enzyme.expasy.org/EC/3.4.22.1 ec-3.4.22.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-Alkyl-2-acyl-glycerol-3-phosphate]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[1-Alkyl-2-acyl-glycerol]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07984]]
+
* Gene: [[SJ13517]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13957]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21389]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07066]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21676]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7782]], plasmalogen biosynthesis:
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P07688 P07688]
 +
** [http://www.uniprot.org/uniprot/P07858 P07858]
 +
** [http://www.uniprot.org/uniprot/P10605 P10605]
 +
** [http://www.uniprot.org/uniprot/P00787 P00787]
 +
** [http://www.uniprot.org/uniprot/P43157 P43157]
 +
** [http://www.uniprot.org/uniprot/P43233 P43233]
 +
** [http://www.uniprot.org/uniprot/Q20950 Q20950]
 +
** [http://www.uniprot.org/uniprot/P43510 P43510]
 +
** [http://www.uniprot.org/uniprot/P43509 P43509]
 +
** [http://www.uniprot.org/uniprot/P43508 P43508]
 +
** [http://www.uniprot.org/uniprot/P43507 P43507]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase|phosphatidate phosphatase}}
+
{{#set: common-name=cathepsin b}}
−
{{#set: ec-number=ec-3.1.3.4}}
+
{{#set: ec-number=ec-3.4.22.1}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 3.4.22.1-RXN

  • direction:
    • left-to-right
  • common-name:
    • cathepsin b
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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