Difference between revisions of "3.4.22.68-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14246 RXN-14246] == * direction: ** reversible == Reaction formula == * 1 MESO-DIAMINOPIMELAT...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11486 RXN-11486] == * direction: ** left-to-right * common-name: ** trans-octaprenyltranstransf...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14246 RXN-14246] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11486 RXN-11486] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** trans-octaprenyltranstransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.85 ec-2.5.1.85]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c]
+
* 5 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 5 [[PPI]][c] '''+''' 1 [[SOLANESYL-PYROPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ10418]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19255]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6520]], nonaprenyl diphosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6520 PWY-6520]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32257 32257]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27595 27595]
−
{{#set: direction=reversible}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R09251 R09251]
−
{{#set: nb pathway associated=0}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: common-name=trans-octaprenyltranstransferase}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: ec-number=ec-2.5.1.85}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction RXN-11486

  • direction:
    • left-to-right
  • common-name:
    • trans-octaprenyltranstransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6520, nonaprenyl diphosphate biosynthesis II: PWY-6520
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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