Difference between revisions of "3.4.23.15-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-AMINOTRANSFERASE-RXN CYSTEINE-AMINOTRANSFERASE-RXN] == * direction: ** reversible * ec-num...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] == * direction:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-AMINOTRANSFERASE-RXN CYSTEINE-AMINOTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** succinate semialdehyde dehydrogenase, nad+-dependent
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.3 ec-2.6.1.3]
+
** [http://enzyme.expasy.org/EC/1.2.1.24 ec-1.2.1.24]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CYS]][c] '''<=>''' 1 [[3-MERCAPTO-PYRUVATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07646]]
+
* Gene: [[SJ05897]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07466]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1534]], hydrogen sulfide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1534 PWY0-1534]
+
* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6473]], 4-aminobutanoate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6473 PWY-6473]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5329]], L-cysteine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5329 PWY-5329]
+
* [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17444 17444]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13218 13218]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00895 R00895]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: ec-number=ec-2.6.1.3}}
+
** [http://www.uniprot.org/uniprot/P51649 P51649]
−
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/P51650 P51650]
−
{{#set: nb pathway associated=2}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common-name=succinate semialdehyde dehydrogenase, nad+-dependent}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec-number=ec-1.2.1.24}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 14:26, 26 August 2019

Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • succinate semialdehyde dehydrogenase, nad+-dependent
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUDEG-I-PWY, GABA shunt: GLUDEG-I-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6473, 4-aminobutanoate degradation IV: PWY-6473
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6535, 4-aminobutanoate degradation I: PWY-6535
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4321, L-glutamate degradation IV: PWY-4321
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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