Difference between revisions of "3.4.23.15-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] == * direction:...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.15-RXN 1.5.1.15-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.15-RXN 1.5.1.15-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** succinate semialdehyde dehydrogenase, nad+-dependent
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.24 ec-1.2.1.24]
+
** [http://enzyme.expasy.org/EC/1.5.1.15 ec-1.5.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05897]]
+
* Gene: [[SJ02922]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
+
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''9''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6473]], 4-aminobutanoate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6473 PWY-6473]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13218 13218]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22893 22893]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01218 R01218]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P51649 P51649]
+
** [http://www.uniprot.org/uniprot/P18155 P18155]
−
** [http://www.uniprot.org/uniprot/P51650 P51650]
+
** [http://www.uniprot.org/uniprot/P13995 P13995]
 +
** [http://www.uniprot.org/uniprot/Q02046 Q02046]
 +
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
 +
** [http://www.uniprot.org/uniprot/Q48977 Q48977]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=succinate semialdehyde dehydrogenase, nad+-dependent}}
+
{{#set: ec-number=ec-1.5.1.15}}
−
{{#set: ec-number=ec-1.2.1.24}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction 1.5.1.15-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2201, folate transformations I: PWY-2201
    • 9 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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