Difference between revisions of "3.5.1.27-RXN"

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(Created page with "Category:reaction == Reaction SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN == * direction: ** left-to-right * common-name: ** dihydrosphingosine phosphate lyase * ec-number: ** [h...")
(Created page with "Category:reaction == Reaction 3.5.1.27-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88] == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN ==
+
== Reaction 3.5.1.27-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** dihydrosphingosine phosphate lyase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27]
+
** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-649]][c] '''=>''' 1 [[PALMITALDEHYDE]][c] '''+''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c]
+
* 1 [[Charged-fMET-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19063]]
+
* Gene: [[SJ06192]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7119]], ceramide and sphingolipid recycling and degradation (yeast):
 
−
** '''4''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR108772
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18594 18594]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02464 R02464]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44786 P44786]
 +
** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dihydrosphingosine phosphate lyase}}
+
{{#set: ec-number=ec-3.5.1.88}}
−
{{#set: ec-number=ec-4.1.2.27}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction 3.5.1.27-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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