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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5482 PWY-5482] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** reversible | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] |
| | * common-name: | | * common-name: |
| − | ** phosphoribulokinase | + | ** pyruvate fermentation to acetate ii |
| − | * ec-number:
| + | == Reaction(s) found == |
| − | ** [http://enzyme.expasy.org/EC/2.7.1.19 ec-2.7.1.19]
| + | * [[PHOSACETYLTRANS-RXN]] |
| − | == Reaction formula == | + | * [[PYRUVDEH-RXN]] |
| − | * 1 [[ATP]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[PROTON]][c]
| + | == Reaction(s) not found == |
| − | == Gene(s) associated with this reaction ==
| + | * [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN] |
| − | * Gene: [[SJ04903]] | + | {{#set: taxonomic-range=tax-2}} |
| − | ** Category: [[annotation]]
| + | {{#set: common-name=pyruvate fermentation to acetate ii}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | + | {{#set: nb reaction found=2}} |
| − | ** Category: [[orthology]]
| + | {{#set: completion rate=0.67}} |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: nb total reaction=3}} |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] | |
| − | ** '''12''' reactions found over '''13''' reactions in the full pathway
| |
| − | * [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
| |
| − | ** '''10''' reactions found over '''10''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19368 19368]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P23010 P23010]
| |
| − | ** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
| |
| − | ** [http://www.uniprot.org/uniprot/P19923 P19923]
| |
| − | ** [http://www.uniprot.org/uniprot/P19924 P19924]
| |
| − | ** [http://www.uniprot.org/uniprot/P23015 P23015]
| |
| − | ** [http://www.uniprot.org/uniprot/P12033 P12033]
| |
| − | ** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
| |
| − | ** [http://www.uniprot.org/uniprot/P09559 P09559]
| |
| − | ** [http://www.uniprot.org/uniprot/P25697 P25697]
| |
| − | ** [http://www.uniprot.org/uniprot/P93681 P93681]
| |
| − | ** [http://www.uniprot.org/uniprot/P19824 P19824]
| |
| − | ** [http://www.uniprot.org/uniprot/P27774 P27774]
| |
| − | {{#set: direction=reversible}} | |
| − | {{#set: common-name=phosphoribulokinase}} | |
| − | {{#set: ec-number=ec-2.7.1.19}}
| |
| − | {{#set: nb gene associated=1}} | |
| − | {{#set: nb pathway associated=2}}
| |
| − | {{#set: reconstruction category=orthology|annotation}} | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | |
