Difference between revisions of "3.5.1.88-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P3-PWY P3-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1239 tax-1239]...")
(Created page with "Category:reaction == Reaction 3.5.1.88-RXN == * direction: ** left-to-right * common-name: ** peptide deformylase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P3-PWY P3-PWY] ==
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== Reaction 3.5.1.88-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1239 tax-1239]
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** left-to-right
 
* common-name:
 
* common-name:
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** gallate degradation iii (anaerobic)
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** peptide deformylase
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== Reaction(s) found ==
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* ec-number:
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* [[BUTYRYL-COA-DEHYDROGENASE-RXN]]
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** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88]
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* [[PHOSACETYLTRANS-RXN]]
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== Reaction formula ==
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* [[RXN-11667]]
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* 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R7-RXN R7-RXN]
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* Gene: [[SJ06192]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R6-RXN R6-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R11-RXN R11-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=GALLATE-DECARBOXYLASE-RXN GALLATE-DECARBOXYLASE-RXN]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.97.1.2-RXN 1.97.1.2-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=R8-RXN R8-RXN]
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== Pathway(s)  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R5-RXN R5-RXN]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: taxonomic-range=tax-1239}}
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=gallate degradation iii (anaerobic)}}
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== External links  ==
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{{#set: nb reaction found=3}}
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* METANETX-RXN : MNXR109727
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{{#set: completion rate=0.27}}
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* RHEA:
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{{#set: nb total reaction=11}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24421 24421]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
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{{#set: direction=left-to-right}}
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{{#set: common-name=peptide deformylase}}
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{{#set: ec-number=ec-3.5.1.88}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction 3.5.1.88-RXN

  • direction:
    • left-to-right
  • common-name:
    • peptide deformylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR109727
  • RHEA:
  • LIGAND-RXN:





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