Difference between revisions of "3.5.1.88-RXN"

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(Created page with "Category:reaction == Reaction GLUTARYL-COA-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** glutaryl-coa dehydrogenase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction 3.5.1.88-RXN == * direction: ** left-to-right * common-name: ** peptide deformylase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTARYL-COA-DEHYDROGENASE-RXN ==
+
== Reaction 3.5.1.88-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glutaryl-coa dehydrogenase
+
** peptide deformylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8.6 ec-1.3.8.6]
+
** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[GLUTARYL-COA]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
* 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07909]]
+
* Gene: [[SJ06192]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR109727
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13389 13389]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24421 24421]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02488 R02488]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q92947 Q92947]
+
{{#set: common-name=peptide deformylase}}
−
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-3.5.1.88}}
−
{{#set: common-name=glutaryl-coa dehydrogenase}}
 
−
{{#set: ec-number=ec-1.3.8.6}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction 3.5.1.88-RXN

  • direction:
    • left-to-right
  • common-name:
    • peptide deformylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR109727
  • RHEA:
  • LIGAND-RXN:





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