Difference between revisions of "3.5.1.98-RXN"

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(Created page with "Category:reaction == Reaction RXN0-5038 == * direction: ** left-to-right * common-name: ** 3',5'-cyclic-amp phosphodiesterase ** camp phosphodiesterase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction HEME-OXYGENASE-DECYCLIZING-RXN == * direction: ** left-to-right * common-name: ** heme oxygenase (decyclizing) * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5038 ==
+
== Reaction HEME-OXYGENASE-DECYCLIZING-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3',5'-cyclic-amp phosphodiesterase
+
** heme oxygenase (decyclizing)
−
** camp phosphodiesterase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.53 ec-3.1.4.53]
+
** [http://enzyme.expasy.org/EC/1.14.14.18 ec-1.14.14.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CAMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
+
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''+''' 3 [[Red-NADPH-Hemoprotein-Reductases]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 3 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 3 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09726]]
+
* Gene: [[SJ20370]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ10845]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14526]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18679]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04705]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5874]], heme degradation I:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25278 25278]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21765 21765]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00191 R00191]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00311 R00311]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P23711 P23711]
 +
** [http://www.uniprot.org/uniprot/P14901 P14901]
 +
** [http://www.uniprot.org/uniprot/P30519 P30519]
 +
** [http://www.uniprot.org/uniprot/P06762 P06762]
 +
** [http://www.uniprot.org/uniprot/P09601 P09601]
 +
** [http://www.uniprot.org/uniprot/Q7M338 Q7M338]
 +
** [http://www.uniprot.org/uniprot/P14791 P14791]
 +
** [http://www.uniprot.org/uniprot/P32394 P32394]
 +
** [http://www.uniprot.org/uniprot/P72849 P72849]
 +
** [http://www.uniprot.org/uniprot/P74133 P74133]
 +
** [http://www.uniprot.org/uniprot/Q9RKR1 Q9RKR1]
 +
** [http://www.uniprot.org/uniprot/O48782 O48782]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3',5'-cyclic-amp phosphodiesterase|camp phosphodiesterase}}
+
{{#set: common-name=heme oxygenase (decyclizing)}}
−
{{#set: ec-number=ec-3.1.4.53}}
+
{{#set: ec-number=ec-1.14.14.18}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:20, 14 January 2021

Reaction HEME-OXYGENASE-DECYCLIZING-RXN

  • direction:
    • left-to-right
  • common-name:
    • heme oxygenase (decyclizing)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5874, heme degradation I:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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