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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE-4-EPIMERASE-RXN UDP-GLUCURONATE-4-EPIMERASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** reversible | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157] |
| | * common-name: | | * common-name: |
| − | ** udp-glucuronate 4-epimerase | + | ** inosine-5'-phosphate biosynthesis iii |
| − | * ec-number:
| + | == Reaction(s) found == |
| − | ** [http://enzyme.expasy.org/EC/5.1.3.6 ec-5.1.3.6]
| + | * [[AICARSYN-RXN]] |
| − | == Reaction formula == | + | * [[IMPCYCLOHYDROLASE-RXN]] |
| − | * 1 [[UDP-GLUCURONATE]][c] '''<=>''' 1 [[UDP-D-GALACTURONATE]][c]
| + | * [[SAICARSYN-RXN]] |
| − | == Gene(s) associated with this reaction ==
| + | == Reaction(s) not found == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] |
| − | * Gene: [[SJ01092]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-10066 RXN-10066] |
| − | ** Category: [[annotation]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN0-743 RXN0-743] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: taxonomic-range=tax-2157}} |
| − | ** Category: [[orthology]]
| + | {{#set: common-name=inosine-5'-phosphate biosynthesis iii}} |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | + | {{#set: nb reaction found=3}} |
| − | * Gene: [[SJ10400]]
| + | {{#set: completion rate=0.5}} |
| − | ** Category: [[annotation]]
| + | {{#set: nb total reaction=6}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ19982]] | |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ04385]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) == | |
| − | * [[PWY-4861]], UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4861 PWY-4861] | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway | |
| − | * [[PWY-6415]], L-ascorbate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415]
| |
| − | ** '''4''' reactions found over '''7''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11407 11407]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01385 R01385]
| |
| − | {{#set: direction=reversible}} | |
| − | {{#set: common-name=udp-glucuronate 4-epimerase}} | |
| − | {{#set: ec-number=ec-5.1.3.6}} | |
| − | {{#set: nb gene associated=4}} | |
| − | {{#set: nb pathway associated=2}} | |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
| |
