Difference between revisions of "3.5.2.17-RXN"

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(Created page with "Category:reaction == Reaction 2.5.1.42-RXN == * direction: ** left-to-right * common-name: ** geranylgeranylglycerol-phosphate geranylgeranyltransferase * ec-number: ** [h...")
(Created page with "Category:reaction == Reaction TCM3 == * direction: ** reversible == Reaction formula == * 1.0 PPI[C_c] '''<=>''' 1.0 PPI[C_m] == Gene(s) associated with this react...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 2.5.1.42-RXN ==
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== Reaction TCM3 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** geranylgeranylglycerol-phosphate geranylgeranyltransferase
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.5.1.42 ec-2.5.1.42]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[SN-GERANYLGERANYLGLYCERYL-1-PHOSPHATE]][c] '''=>''' 1 [[BIS-GERANYLGERANYLGLYCEROL-PHOSPHATE]][c] '''+''' 1 [[PPI]][c]
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* 1.0 [[PPI]][C_c] '''<=>''' 1.0 [[PPI]][C_m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09061]]
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* Gene: [[SJ21571]]
−
** Category: [[annotation]]
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** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6349]], CDP-archaeol biosynthesis:
 
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** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18110 18110]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R04520 R04520]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=geranylgeranylglycerol-phosphate geranylgeranyltransferase}}
 
−
{{#set: ec-number=ec-2.5.1.42}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:35, 5 January 2021

Reaction TCM3

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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