Difference between revisions of "3.6.1.41-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14285 RXN-14285] == * direction: ** left-to-right * common-name: ** phosphorylase * ec-number:...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2142 RXN0-2142] == * direction: ** left-to-right * common-name: ** 3-oxo-cis-δ5-dodeceno...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2142 RXN0-2142] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** 3-oxo-cis-δ5-dodecenoyl-[acp] reductase |
| + | ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ04229]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ17743]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[SJ13014]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY0-862]], (5Z)-dodecenoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-7858]], (5Z)-dodecenoate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7858 PWY-7858] | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=3-oxo-cis-δ5-dodecenoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.1.1.100}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:26, 26 August 2019
Contents
Reaction RXN0-2142
- direction:
- left-to-right
- common-name:
- 3-oxo-cis-δ5-dodecenoyl-[acp] reductase
- 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
- ec-number:
Reaction formula
- 1 NADPH[c] + 1 PROTON[c] + 1 b-Keto-cis-D5-dodecenoyl-ACPs[c] => 1 NADP[c] + 1 b-Hydroxy-cis-D5-dodecenoyl-ACPs[c]
Gene(s) associated with this reaction
- Gene: SJ04229
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ17743
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ13014
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-862, (5Z)-dodecenoate biosynthesis I: PWY0-862
- 5 reactions found over 6 reactions in the full pathway
- PWY-7858, (5Z)-dodecenoate biosynthesis II: PWY-7858
- 4 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- Property "Common-name" (as page type) with input value "3-oxo-cis-δ5-dodecenoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
