Difference between revisions of "3.6.1.41-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] == * direction: ** left-to-right * common-name: ** udp-n-acetylglucosami...")
(Created page with "Category:reaction == Reaction GUANINE-DEAMINASE-RXN == * direction: ** left-to-right * common-name: ** guanine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] ==
+
== Reaction GUANINE-DEAMINASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-n-acetylglucosamine—dolichyl-phosphate n-acetylglucosaminephosphotransferase
+
** guanine deaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.8.15 ec-2.7.8.15]
+
** [http://enzyme.expasy.org/EC/3.5.4.3 ec-3.5.4.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DOLICHOLP]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[CPD-190]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[GUANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02910]]
+
* Gene: [[SJ08613]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 +
** '''6''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6606]], guanosine nucleotides degradation II:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6608]], guanosine nucleotides degradation III:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13289 13289]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14666 14666]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01007 R01007]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P07286 P07286]
 
−
** [http://www.uniprot.org/uniprot/P23338 P23338]
 
−
** [http://www.uniprot.org/uniprot/P42864 P42864]
 
−
** [http://www.uniprot.org/uniprot/P39465 P39465]
 
−
** [http://www.uniprot.org/uniprot/Q9UY90 Q9UY90]
 
−
** [http://www.uniprot.org/uniprot/Q58513 Q58513]
 
−
** [http://www.uniprot.org/uniprot/P42867 P42867]
 
−
** [http://www.uniprot.org/uniprot/P42881 P42881]
 
−
** [http://www.uniprot.org/uniprot/P96000 P96000]
 
−
** [http://www.uniprot.org/uniprot/Q9M2M5 Q9M2M5]
 
−
** [http://www.uniprot.org/uniprot/O22211 O22211]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=udp-n-acetylglucosamine—dolichyl-phosphate n-acetylglucosaminephosphotransferase}}
+
{{#set: common-name=guanine deaminase}}
−
{{#set: ec-number=ec-2.7.8.15}}
+
{{#set: ec-number=ec-3.5.4.3}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 20:39, 18 December 2020

Reaction GUANINE-DEAMINASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • guanine deaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5497, purine nucleobases degradation II (anaerobic):
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic):
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-6606, guanosine nucleotides degradation II:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6608, guanosine nucleotides degradation III:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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