Difference between revisions of "3.6.3.16-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY6666-2 PWY6666-2] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEMN-RXN HEMN-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY6666-2 PWY6666-2] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEMN-RXN HEMN-RXN] ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** left-to-right
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* common-name:
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* ec-number:
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** dopamine degradation
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** [http://enzyme.expasy.org/EC/1.3.98.3 ec-1.3.98.3]
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== Reaction(s) found ==
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== Reaction formula ==
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* [[RXN6666-4]]
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* 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c]
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* [[RXN6666-5]]
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== Gene(s) associated with this reaction  ==
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* [[RXN6666-9]]
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* Gene: [[SJ03663]]
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== Reaction(s) not found ==
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-7 RXN6666-7]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-6 RXN6666-6]
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* Gene: [[SJ20556]]
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{{#set: taxonomic-range=tax-33208}}
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** Category: [[orthology]]
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{{#set: common-name=dopamine degradation}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=3}}
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* Gene: [[SJ05457]]
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{{#set: completion rate=0.6}}
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** Category: [[orthology]]
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{{#set: nb total reaction=5}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ16512]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ06609]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[HEMESYN2-PWY]], heme b biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15426 15426]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R06895 R06895]
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{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-1.3.98.3}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:33, 27 August 2019

Reaction HEMN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • HEMESYN2-PWY, heme b biosynthesis II (anaerobic): HEMESYN2-PWY
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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