Difference between revisions of "3.6.3.16-RXN"
Jump to navigation
Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY6666-2 PWY6666-2] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEMN-RXN HEMN-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1....") |
||
Line 1: | Line 1: | ||
− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEMN-RXN HEMN-RXN] == |
− | * | + | * direction: |
− | ** [http:// | + | ** left-to-right |
− | + | * ec-number: | |
− | + | ** [http://enzyme.expasy.org/EC/1.3.98.3 ec-1.3.98.3] | |
− | == | + | == Reaction formula == |
− | * [[ | + | * 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] |
− | * [[ | + | == Gene(s) associated with this reaction == |
− | * [[ | + | * Gene: [[SJ03663]] |
− | == | + | ** Category: [[orthology]] |
− | * [http://metacyc.org/META/NEW-IMAGE?object= | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * [http://metacyc.org/META/NEW-IMAGE?object= | + | * Gene: [[SJ20556]] |
− | {{#set: | + | ** Category: [[orthology]] |
− | {{#set: | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: nb | + | * Gene: [[SJ05457]] |
− | {{#set: | + | ** Category: [[orthology]] |
− | {{#set: | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ16512]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ06609]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531] | ||
+ | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[HEMESYN2-PWY]], heme b biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15426 15426] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R06895 R06895] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: ec-number=ec-1.3.98.3}} | ||
+ | {{#set: nb gene associated=5}} | ||
+ | {{#set: nb pathway associated=2}} | ||
+ | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction tool=pantograph}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Revision as of 09:33, 27 August 2019
Contents
Reaction HEMN-RXN
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 COPROPORPHYRINOGEN_III[c] + 2 S-ADENOSYLMETHIONINE[c] => 2 CARBON-DIOXIDE[c] + 2 CH33ADO[c] + 2 MET[c] + 1 PROTOPORPHYRINOGEN[c]
Gene(s) associated with this reaction
- Gene: SJ03663
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ20556
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ05457
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ16512
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ06609
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
- 4 reactions found over 9 reactions in the full pathway
- HEMESYN2-PWY, heme b biosynthesis II (anaerobic): HEMESYN2-PWY
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links